CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18995	Sorghum	nucleus	52.78	55.07
Zm00001d050594_P001	Maize	nucleus	39.58	54.03
KXG21281	Sorghum	nucleus	29.17	48.55
KXG21283	Sorghum	nucleus	38.54	45.49
Zm00001d024809_P001	Maize	nucleus	44.1	44.41
EER89299	Sorghum	nucleus	43.06	40.52
TraesCS1B01G283000.1	Wheat	nucleus	24.31	38.89
EER88198	Sorghum	nucleus	42.71	38.68
OQU76057	Sorghum	nucleus	40.97	38.44
OQU77390	Sorghum	nucleus	31.6	37.3
EER89573	Sorghum	nucleus	39.93	36.39
TraesCS7B01G093600.1	Wheat	nucleus	22.22	35.56
EER94504	Sorghum	nucleus	35.42	35.42
EER88196	Sorghum	nucleus	38.54	35.13
EES18997	Sorghum	nucleus	45.49	34.84
TraesCS7B01G019400.1	Wheat	nucleus	28.47	34.31
EER89387	Sorghum	nucleus	37.85	34.28
KXG21280	Sorghum	nucleus	41.32	33.43
TraesCS7D01G189800.2	Wheat	nucleus	22.92	33.33
TraesCS7A01G188800.1	Wheat	nucleus	20.83	33.15
OQU77389	Sorghum	nucleus	37.85	32.63
TraesCS7B01G019200.1	Wheat	nucleus	30.56	32.12
TraesCS7D01G108000.1	Wheat	nucleus	30.21	31.75
TraesCS7A01G121100.1	Wheat	nucleus	30.21	31.75
TraesCS7A01G120900.1	Wheat	nucleus	28.12	31.4
KXG21278	Sorghum	nucleus	37.5	31.4
TraesCS7D01G118600.1	Wheat	nucleus	29.86	31.39
HORVU7Hr1G024150.1	Barley	nucleus	25.69	31.09
HORVU7Hr1G038390.1	Barley	mitochondrion, nucleus, plastid	20.83	29.27
TraesCS7A01G135300.1	Wheat	nucleus	29.17	28.77
TraesCS1D01G362000.1	Wheat	nucleus	30.21	28.62
HORVU1Hr1G080380.1	Barley	nucleus	33.33	28.49
TraesCS7D01G108100.1	Wheat	nucleus	26.39	27.84
TraesCS1B01G374300.1	Wheat	nucleus	33.68	27.71
HORVU7Hr1G025580.1	Barley	cytosol, nucleus, plastid	28.12	27.18
TraesCS1A01G357600.1	Wheat	nucleus	32.29	26.57
HORVU7Hr1G028140.1	Barley	nucleus	18.75	25.0
TraesCS7A01G135200.1	Wheat	nucleus	32.29	21.68
TraesCS7A01G135100.1	Wheat	nucleus	31.94	21.45
TraesCS7B01G036700.1	Wheat	nucleus	31.6	21.26
TraesCS7B01G036500.1	Wheat	nucleus	31.25	20.93
TraesCS7D01G135700.1	Wheat	nucleus	31.6	20.92
TraesCS7D01G135200.1	Wheat	nucleus	30.56	20.51
TraesCS7D01G135000.1	Wheat	nucleus	30.56	20.47
TraesCS7D01G135300.1	Wheat	nucleus	30.56	20.47
TraesCS7A01G135000.1	Wheat	nucleus	30.21	20.28
TraesCS7A01G135400.1	Wheat	nucleus	30.21	20.23
Os06t0173800-00	Rice	vacuole	22.57	19.88
TraesCS7D01G135600.1	Wheat	nucleus	23.26	18.82
TraesCS7D01G135500.1	Wheat	nucleus	26.04	18.7
PGSC0003DMT400086891	Potato	nucleus	12.85	17.13
TraesCS2B01G617700.1	Wheat	nucleus	23.26	16.79
Solyc02g082380.1.1	Tomato	nucleus	12.85	16.67
TraesCS2D01G567700.1	Wheat	nucleus	21.53	16.4
Solyc02g082390.1.1	Tomato	nucleus	12.85	13.17
KXG36349	Sorghum	nucleus	12.85	10.08
PGSC0003DMT400091980	Potato	nucleus	12.85	9.18
OQU89906	Sorghum	nucleus	7.64	6.53

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EntrezGene:8068214	UniProt:C5YZP0	EnsemblPlants:EES18996	ProteinID:EES18996
ProteinID:EES18996.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR44042	PANTHER:PTHR44042:SF3
InterPro:SANT/Myb	SMART:SM00717	EnsemblPlantsGene:SORBI_3009G039100	SUPFAM:SSF46689	unigene:Sbi.12176	TIGRFAMs:TIGR01557
UniParc:UPI0001A88B98	RefSeq:XP_002440566.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:3680958..3682314

Molecular Weight (calculated)

33186.7 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.755

Length

288 amino acids

Sequence
(BLAST)

001: MDPKFNGDWS ANEIEMVRSI IASHDANSSC TNNRNAKHYG IVDELHARFP RKNKRQVIDL YVDLVVEMLN AMEMSSNQLP MMSNDLVVDN FGVMVENPGM
101: HSMDLFPSYL IDEMKAKRTV EEQHHRQVVV PQEDKQRARR FWTLAEHRNF LLGLRAYGRG NWKNISKDFV TTKTPVQVSS HAQKFFRRQE STTKKQRYSI
201: NDVSLYDAKL WVQDNSSSWE AFTSNAYNPY SYGFGGQLTM DNLTQVYSAS QASNNQTLTW TGDQQTSSPS AAPTTEEDGT QMEWTNYY

Best Arabidopsis Sequence Match ( AT2G38090.1 )
(BLAST)

001: MNRGIEVMSP ATYLETSNWL FQENRGTKWT AEENKKFENA LAFYDKDTPD RWSRVAAMLP GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YASDSFTLDW
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GXN7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.