Factsheet for GSMUA_Achr10P18170_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 1
extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 6
vacuole 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum	53.09	46.74
GSMUA_Achr10P...	Banana	plastid	54.57	45.85
GSMUA_Achr10P...	Banana	endoplasmic reticulum	51.36	43.51
GSMUA_Achr10P...	Banana	endoplasmic reticulum	52.1	42.03
GSMUA_Achr6P30780_001	Banana	endoplasmic reticulum, golgi	29.38	32.16
GSMUA_Achr5P01570_001	Banana	endoplasmic reticulum	31.6	29.63
GSMUA_Achr6P30790_001	Banana	endoplasmic reticulum	26.91	28.99
GSMUA_Achr7P26390_001	Banana	golgi, vacuole	26.91	25.35
GSMUA_Achr4P14250_001	Banana	extracellular, plasma membrane	19.75	24.1

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr10G18170_001	EnsemblPlants:GSMUA_Achr10P18170_001	EnsemblPlants:GSMUA_Achr10T18170_001	InterPro:IPR036396	UniProt:M0RJ92	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF205	SUPFAM:SSF48264
UniParc:UPI000294DFAD	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G18170_001]

Coordinates

chr10:-:25024617..25028298

Molecular Weight (calculated)

45363.5 Da

IEP (calculated)

5.429

GRAVY (calculated)

0.017

Length

405 amino acids

Sequence
(BLAST)

001: MNNLHAEIGM SISCIIIIHI NLKPMLAHCV ILFECGGAVG NGDKGRATVI DVMLSLQESD PGTYTDVTIK GLIVELMAAG TDTSAVTIEW AMCLLLIHPE
101: VLHTARAELD ARIGQGRMVE EEDIPNLPYL NCIINETLRL YHAVPLLVPH ESSQDCTVGG YDVPCGTMLL TNAWAIHRDP NIWDEPEEFK PERFQCEGGK
201: EETGLRMLPF GSGRRKCPGE GLAIRLIGLA LAILIHCFEW EKLPGEEVDM TEGQGLSMPK VKPLESMANT FLLFKSCLWV RCLIRGLLYD RYLYYLTPYK
301: SSNLHAVSSY LRVMLHPLRQ IHQIMDYNKE GSEINKRSKE QLTELSNDDY LYPILNYKIS LRVDKVKLLR VQWAVAVRVD QPLVAVVETA PGDGGIPYQL
401: PSCTI

Best Arabidopsis Sequence Match ( AT1G66540.1 )
(BLAST)

001: MVSAPYSEHW RNLRRIGAVE IFSNHRLNSF YTIRRDEIRR LIARLSRSPN ASLEFAKVEM NSMLSNLAFN NIIRMVTGKC YYGDGAEDDP EAKRVRQLIA
101: EAMSCFGAGH AADHLPMLRW ITDFERRVKK IAARLDEFFQ RLVDEKRVAK EKKENTMIDH LLSLQVSQPE YYTDHTIKGT MLSLILAGTD TSAVTLEWAL
201: SSLLNNPEVL KKVRDEIDNQ IGLDRLLEES DIPNLPYLQN IVSETLRLYP AGPLLVPHIS SEDCKVGGYD MPCGTMLLVN VWAIHRDPRL WDDPASFKPE
301: RFEKEGETHK LLTFGLGRRA CPGSGLARRL VSLSLGSLIQ CFEWERIGEE EVDMTEGGGL TMPRAIPLVA MCRARAFVGK IPHESG

Arabidopsis Description

At1g66540 [Source:UniProtKB/TrEMBL;Acc:A2RVN3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.