Factsheet for GSMUA_Achr1P20220_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G295000.2	Wheat	extracellular, mitochondrion, plasma membrane, plastid	41.72	28.12
GSMUA_Achr5P26560_001	Banana	extracellular	40.4	17.58
GSMUA_Achr6P36830_001	Banana	plasma membrane	70.86	17.18
GSMUA_Achr4P04820_001	Banana	cytosol	63.58	16.55
GSMUA_Achr5P19890_001	Banana	plasma membrane	62.91	15.97
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	58.94	14.91
GSMUA_Achr8P01580_001	Banana	extracellular	49.01	14.34
GSMUA_Achr11P...	Banana	vacuole	49.67	14.23
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	49.01	14.12
GSMUA_Achr5P27810_001	Banana	extracellular	49.01	14.04
GSMUA_Achr3P17240_001	Banana	cytosol	52.32	13.34
GSMUA_Achr4P29540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	49.01	13.31
GSMUA_Achr11P...	Banana	extracellular	45.7	13.04
GSMUA_Achr8P09380_001	Banana	extracellular	45.03	12.95
GSMUA_Achr10P...	Banana	extracellular, golgi	48.34	12.94
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	46.36	12.57
GSMUA_AchrUn_...	Banana	extracellular	43.71	12.52
GSMUA_Achr10P...	Banana	extracellular	45.03	12.41
GSMUA_Achr5P11580_001	Banana	extracellular	42.38	11.87
GSMUA_Achr6P34670_001	Banana	extracellular	41.72	11.84
GSMUA_Achr3P09610_001	Banana	plastid	47.68	11.78
GSMUA_Achr8P15900_001	Banana	extracellular	41.72	11.6
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	47.68	11.52
GSMUA_Achr9P25000_001	Banana	extracellular	41.06	11.42
GSMUA_Achr7P00290_001	Banana	extracellular	40.4	11.25
GSMUA_Achr4P27750_001	Banana	extracellular	39.74	11.09
GSMUA_Achr1P20210_001	Banana	cytosol	13.91	5.2
GSMUA_Achr5P26550_001	Banana	cytosol	2.65	3.08

Protein Annotations

EnsemblPlants:GSMUA_Achr1P20220_001	EnsemblPlants:GSMUA_Achr1T20220_001	EnsemblPlantsGene:GSMUA_Achr1G20220_001	Gene3D:2.60.40.420	GO:GO:0003674	GO:GO:0005488
GO:GO:0005507	InterPro:Cu-oxidase_3	InterPro:Cupredoxin	InterPro:IPR008972	PANTHER:PTHR11709	PANTHER:PTHR11709:SF124
PFAM:PF07732	SEG:seg	SUPFAM:SSF49503	UniParc:UPI0002952FD4	UniProt:M0S1I0	MapMan:35.1

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G20220_001]

Coordinates

chr1:-:15163703..15164570

Molecular Weight (calculated)

16081.1 Da

IEP (calculated)

8.063

GRAVY (calculated)

-0.062

Length

151 amino acids

Sequence
(BLAST)

001: MLPSSAGDPF AYFDWDVSYI TASPLGVPRK VIAISKQFPG PIMNVTTNWN VVVNVLNSLD EPVLLTWDGI QHRKNCWQDG VMGTNCPIPP GWNWTRSAAS
101: STSPPSASSE LLVAMVGSLS TTVKSSPCHL GSQMGTSPSL SGIGTSRTTR T

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.