Factsheet for GSMUA_Achr1P26060_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 2
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P13240_001	Banana	extracellular, plastid	41.44	73.6
GSMUA_Achr3P00830_001	Banana	endoplasmic reticulum, plasma membrane	52.25	59.18
TraesCS7D01G509900.1	Wheat	endoplasmic reticulum, extracellular	41.89	56.02
HORVU7Hr1G115850.2	Barley	endoplasmic reticulum, plastid	43.69	54.49
TraesCS7B01G436600.1	Wheat	extracellular	45.5	49.03
GSMUA_Achr4P26830_001	Banana	plastid	28.38	47.73
Os06t0643500-01	Rice	extracellular	54.05	47.06
TraesCS7D01G509800.1	Wheat	plasma membrane	52.25	42.03
EER88705	Sorghum	extracellular	57.66	41.42
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	28.83	41.29
TraesCS7B01G436700.1	Wheat	plasma membrane	54.5	41.16
Zm00001d046596_P001	Maize	extracellular	55.41	40.46
HORVU7Hr1G115830.3	Barley	extracellular	54.05	39.22
GSMUA_Achr4P29020_001	Banana	plastid	35.14	37.32
TraesCS7A01G520100.1	Wheat	extracellular	51.35	37.25
HORVU7Hr1G115810.1	Barley	plastid	51.35	30.24

Protein Annotations

EnsemblPlants:GSMUA_Achr1P26060_001	EnsemblPlants:GSMUA_Achr1T26060_001	EnsemblPlantsGene:GSMUA_Achr1G26060_001	Gene3D:1.10.110.10	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store
InterPro:Hydrophob_seed	PANTHER:PTHR31731	PANTHER:PTHR31731:SF54	PFAM:PF14547	SEG:seg	SMART:SM00499
SUPFAM:SSF47699	UniParc:UPI000296F30B	UniProt:M0S363	MapMan:35.2	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G26060_001]

Coordinates

chr1:-:20656298..20657210

Molecular Weight (calculated)

22857.2 Da

IEP (calculated)

9.684

GRAVY (calculated)

0.350

Length

222 amino acids

Sequence
(BLAST)

001: MLFLSSVSPV VSAGTCPPTK HKPPKSKHHK PKTPTHKPPI TVPPVVGKPP ITVPPVIGKP PITVPPVIGK PPITVPPVIG KPPIIVPPIT VPPVIGKPPI
101: TEPPVVGVPP VVIPPTLPPR NTPCPPPPPP PAPPASPSCP VDTLKVGACV DLLGGLVHIG IGDPVVNRCC PLLQGLVEIE AAVCLCTSIK LKLLNINIYL
201: PLALQLLLTC GKTPPPGYTC TI

Best Arabidopsis Sequence Match ( AT2G10940.2 )
(BLAST)

001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I

Arabidopsis Description

At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.