Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55650 | Soybean | mitochondrion, plastid | 29.58 | 32.56 |
| KRG88502 | Soybean | vacuole | 25.82 | 29.18 |
| KRH27097 | Soybean | cytosol, mitochondrion | 31.46 | 17.75 |
| Solyc07g064110.2.1 | Tomato | plastid | 35.21 | 17.65 |
| TraesCS6A01G096500.1 | Wheat | cytosol, mitochondrion | 34.04 | 16.82 |
| TraesCS6D01G087600.1 | Wheat | cytosol, plastid | 34.04 | 16.82 |
| TraesCS6B01G124900.1 | Wheat | cytosol, plastid | 34.27 | 16.76 |
| HORVU6Hr1G017720.35 | Barley | plastid | 32.63 | 15.65 |
| Bra029518.1-P | Field mustard | plastid | 27.46 | 15.39 |
| OQU84311 | Sorghum | mitochondrion | 34.98 | 15.22 |
| Bra013567.1-P | Field mustard | cytosol, mitochondrion | 27.46 | 15.02 |
| Zm00001d015156_P001 | Maize | plastid | 33.33 | 14.82 |
| AT4G04790.1 | Thale cress | cytosol, mitochondrion | 27.93 | 14.49 |
| CDX94576 | Canola | plastid | 27.7 | 14.3 |
| CDY16646 | Canola | plastid | 27.46 | 14.29 |
| CDX79101 | Canola | cytosol, mitochondrion | 27.7 | 14.27 |
| CDX82873 | Canola | cytosol, mitochondrion | 28.17 | 14.0 |
| AT4G21880.1 | Thale cress | cytosol | 27.46 | 13.88 |
| VIT_19s0014g05230.t01 | Wine grape | cytosol | 13.62 | 9.88 |
| KRH22239 | Soybean | cytosol | 7.98 | 7.23 |
| Os02t0132600-02 | Rice | cytosol | 6.1 | 4.81 |
| KRH25865 | Soybean | cytosol | 0.94 | 2.72 |
| KRH55647 | Soybean | cytosol | 2.58 | 2.37 |
| KRH25868 | Soybean | cytosol, nucleus, plastid | 1.41 | 2.16 |
| PGSC0003DMT400049471 | Potato | cytosol | 2.11 | 2.09 |
| GSMUA_Achr1P26200_001 | Banana | extracellular | 1.64 | 1.97 |
| KRG88500 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P26220_001 | EnsemblPlants:GSMUA_Achr1T26220_001 | EnsemblPlantsGene:GSMUA_Achr1G26220_001 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF623 | SEG:seg |
| UniParc:UPI000296C7EC | UniProt:M0S379 | MapMan:35.1 | : | : | : |
Description
Putative Pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G26220_001]
Coordinates
chr1:-:21493242..21505803
Molecular Weight (calculated)
48067.8 Da
IEP (calculated)
9.450
GRAVY (calculated)
-0.373
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSKKLSSLF AAFAATKTSK NPKPVPPSPE FVPPKKSPDP IHFTNSSPPS SGSETAEKPA GVVSKQVLSR LKPAASRISK SSLAPAVDSA FGISKAISSI
101: LSGDNDMSHP SSSKESTDGM LLKNILDVPW FSSMSQINTT QWKKEVSRER KQKYIFKNTE SRRFVELMKK CADKLGTKST VEFFGRLGRE MGLREYNALI
201: GLCISKARNC SNEEDSMVHI KKAYGLFASM REKGLQIEEQ SYGPLLMYMI DMKLTQEFQM FSEFFKDENP ESSSRIGYYE MLLWISVGNE DKIRELIDSV
301: GVADTQDSYK FAESYLLAFC KSDRKEELLR LLEVVNIWKV SSPKYINSVF QTLGRLQLEA STEKIILQLK TAGFGEEDIS FYIYEYTTCV PNLAVYRAVH
401: PILPIYPSKI PENWKKKVRI GFSSYK
101: LSGDNDMSHP SSSKESTDGM LLKNILDVPW FSSMSQINTT QWKKEVSRER KQKYIFKNTE SRRFVELMKK CADKLGTKST VEFFGRLGRE MGLREYNALI
201: GLCISKARNC SNEEDSMVHI KKAYGLFASM REKGLQIEEQ SYGPLLMYMI DMKLTQEFQM FSEFFKDENP ESSSRIGYYE MLLWISVGNE DKIRELIDSV
301: GVADTQDSYK FAESYLLAFC KSDRKEELLR LLEVVNIWKV SSPKYINSVF QTLGRLQLEA STEKIILQLK TAGFGEEDIS FYIYEYTTCV PNLAVYRAVH
401: PILPIYPSKI PENWKKKVRI GFSSYK
001: MVVSKVNKSL LSSVFKSRIR PTGESSIASG NKDIAGTSQA VKDLLSSKNS SSDLEEASLQ DRVSKLLHVT TSDKSSLEKN LFLKIPSFTT KIPYDISLRT
101: KELSRERKER RVYKQNGLSR RFAKIFRDSA QKLGTEAMFG AFDRVAKEMS VTEYNAMIGV YLEHAEKSND LDYALGHIEK AFELLKSMRD RGFLIEERVY
201: GPLLGYLIGM DMVDEFHSFK DVIREASPGS VERLGYYEML LWIHLGDGEK IEELCSTIDG DNGESLSVLQ ENYLLALCKK DQKYHLERLL EIVDITKVRS
301: SDLLANIFEY LGRFSLDSVA SRFLWELRES DEGVKNVSDL ISIYSTCTPN PTVEDTILKF NKMHEELDVM PSSTSYEKLV KYSCDSNEVV TALDVVEKMG
401: EAGLMISADI LHSLLHAIDE VLEFDLVRRI HSIMCTKSVK PNTENFRSII RLCTRIKDFE GAYNMLGNLK NFNLEPNSSM FNCILAGYFR EKNVSSALMV
501: VKQMKEAGVK PDSITFGYLI NNCTQEDAIT KYYEEMKQAG VQATKRIYMS LIDAYAASGK FEKAKQVLVD PDVPAINQNE LKSVLISALA SRGKWADALH
601: IYEEMRKAEC HVDPKSIISL IEYSDSKGEL STLVQLADDL QDDTSWIDGF FRMILFAVRN KKSSDIVDLL KRNKVRLLKK GIPVEAHFDE VFWAIAETEP
701: SKVHLGMDLL RFMKDELGFV PSRKCLDFLL HACVNAKDLE HGLLVWKEYQ SAAFPCNVLS FLRMYQVLLA AGDSEGAKAL VSKIPKDDKD VQHIIEESQS
801: AFSQAPNKKK PKKKMIVLST K
101: KELSRERKER RVYKQNGLSR RFAKIFRDSA QKLGTEAMFG AFDRVAKEMS VTEYNAMIGV YLEHAEKSND LDYALGHIEK AFELLKSMRD RGFLIEERVY
201: GPLLGYLIGM DMVDEFHSFK DVIREASPGS VERLGYYEML LWIHLGDGEK IEELCSTIDG DNGESLSVLQ ENYLLALCKK DQKYHLERLL EIVDITKVRS
301: SDLLANIFEY LGRFSLDSVA SRFLWELRES DEGVKNVSDL ISIYSTCTPN PTVEDTILKF NKMHEELDVM PSSTSYEKLV KYSCDSNEVV TALDVVEKMG
401: EAGLMISADI LHSLLHAIDE VLEFDLVRRI HSIMCTKSVK PNTENFRSII RLCTRIKDFE GAYNMLGNLK NFNLEPNSSM FNCILAGYFR EKNVSSALMV
501: VKQMKEAGVK PDSITFGYLI NNCTQEDAIT KYYEEMKQAG VQATKRIYMS LIDAYAASGK FEKAKQVLVD PDVPAINQNE LKSVLISALA SRGKWADALH
601: IYEEMRKAEC HVDPKSIISL IEYSDSKGEL STLVQLADDL QDDTSWIDGF FRMILFAVRN KKSSDIVDLL KRNKVRLLKK GIPVEAHFDE VFWAIAETEP
701: SKVHLGMDLL RFMKDELGFV PSRKCLDFLL HACVNAKDLE HGLLVWKEYQ SAAFPCNVLS FLRMYQVLLA AGDSEGAKAL VSKIPKDDKD VQHIIEESQS
801: AFSQAPNKKK PKKKMIVLST K
Arabidopsis Description
Pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ81]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.