Factsheet for GSMUA_Achr4P23820_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P03770_001	Banana	golgi, plasma membrane, vacuole	64.12	69.14
GSMUA_Achr2P14120_001	Banana	plasma membrane	64.31	64.56
GSMUA_Achr8P01450_001	Banana	golgi, plasma membrane, plastid, vacuole	59.35	64.52
GSMUA_Achr9P24550_001	Banana	golgi, plasma membrane, vacuole	63.74	64.23
GSMUA_Achr11P...	Banana	plasma membrane	57.44	63.64
GSMUA_Achr9P02830_001	Banana	plasma membrane	58.59	63.56
GSMUA_Achr5P26540_001	Banana	extracellular, plasma membrane, vacuole	53.44	62.5
GSMUA_Achr11P...	Banana	golgi, plasma membrane, plastid, vacuole	52.29	62.27
GSMUA_Achr2P10700_001	Banana	golgi, plasma membrane, vacuole	53.63	58.66
GSMUA_Achr4P29880_001	Banana	plasma membrane	53.82	58.14
GSMUA_Achr10P...	Banana	plasma membrane	55.15	57.46
GSMUA_Achr7P27070_001	Banana	plasma membrane	48.66	53.12
GSMUA_Achr6P36920_001	Banana	plasma membrane	45.23	51.41
GSMUA_Achr9P13110_001	Banana	plasma membrane	46.37	50.62
GSMUA_Achr4P03620_001	Banana	plasma membrane	46.56	50.1
GSMUA_Achr1P06040_001	Banana	plasma membrane	43.89	48.32
GSMUA_Achr3P06440_001	Banana	golgi, plasma membrane, vacuole	46.56	47.94
GSMUA_Achr3P06460_001	Banana	peroxisome, plasma membrane, vacuole	45.04	47.2
GSMUA_Achr7P06560_001	Banana	mitochondrion, plasma membrane	43.7	47.12
GSMUA_Achr11P...	Banana	plasma membrane	44.66	46.06
GSMUA_Achr9P11150_001	Banana	plasma membrane	44.47	45.78
GSMUA_Achr6P22680_001	Banana	plasma membrane	43.51	43.76
GSMUA_Achr11P...	Banana	plasma membrane	42.94	41.28
GSMUA_Achr8P27410_001	Banana	golgi, peroxisome, plasma membrane	36.83	27.77

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr4G23820_001
EnsemblPlants:GSMUA_Achr4P23820_001	EnsemblPlants:GSMUA_Achr4T23820_001	InterPro:IPR020846	UniProt:M0SRJ3	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500
PANTHER:PTHR23500:SF336	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix
UniParc:UPI0002959257	SEG:seg	:	:	:	:

Description

Sugar carrier protein C [Source:GMGC_GENE;Acc:GSMUA_Achr4G23820_001]

Coordinates

chr4:+:23818713..23821880

Molecular Weight (calculated)

57734.3 Da

IEP (calculated)

10.271

GRAVY (calculated)

0.387

Length

524 amino acids

Sequence
(BLAST)

001: MAITGFVSGR SSTQKAYPGK TTPFVILTCL VAATSGLIFG YDLGISGGVT SMEPFLSKFF PSVHRKMMMA AERSSNQYCK FDSQLLTTFT SSLYLATLVT
101: SLLASTVTRA LGRKNSMLIG GVIFLAGSVM NGAAENVAML IVGRILLGVG VGFACQSTPL YLSEMAPPHL RGMLNMGFQL MITFGIFSAN LINYGTSKII
201: GDWSWRISLS LAAVPATIIT VGSVFLPDSP NSLVARGHTE KARTTLQRIR GIQDVDEEFN DMVAASDESK RVRHGWSNMG KRKHRPQLVM AVLLPSFQQL
301: TGINVIMFYA PVLFKTIGFG SNGSLMSAVI VGLVNMFATL VSISTVDKIG RRLLYLEGGP QMFVCQIIVG TLIAVNFGST GEASMSKLYA WIVIRTAAQS
401: LAISVNMFFT FSIAQAFLPL LCHLKFGLFY FFGGWVVIMT TFIYFFLPET KNIPIEKMVL VWRDHWFWGR FIDDDGHAHG GQEPVDAVEN NRKVMFKHFL
501: VYKATQIVPQ LRIKNQIQNI GRIR

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.