Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00180_001 | Banana | cytosol | 30.1 | 32.98 |
| GSMUA_Achr2P14040_001 | Banana | plastid | 31.07 | 13.91 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P23990_001 | EnsemblPlants:GSMUA_Achr4T23990_001 | EnsemblPlantsGene:GSMUA_Achr4G23990_001 | Gene3D:3.50.50.60 | InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 |
| PFAM:PF01946 | SEG:seg | UniParc:UPI00029533EB | UniProt:M0SRL0 | MapMan:35.2 | : |
Description
Putative Thiazole biosynthetic enzyme, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G23990_001]
Coordinates
chr4:-:23963308..23964049
Molecular Weight (calculated)
11710.0 Da
IEP (calculated)
4.917
GRAVY (calculated)
-0.289
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVFLPSIFL FRCFARPNVE FFNTVAAEDR IVEEGRLNMN AAEDNSVRLI REVVPGMIVA GMEITEIDRA PRMGEAELAE TNRGRRPLGD DDPGRRHWSF
101: ISK
101: ISK
001: MAAIASTLSL SSTKPQRLFD SSFHGSAISA APISIGLKPR SFSVRATTAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSAAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA
Arabidopsis Description
THI1Thiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UNL2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.