Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 2
- golgi 1
- vacuole 2
- plastid 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P13240_001 | Banana | extracellular, plastid | 50.0 | 52.8 |
| GSMUA_Achr4P29020_001 | Banana | plastid | 65.15 | 41.15 |
| KRH57376 | Soybean | plasma membrane | 54.55 | 40.22 |
| KRH04104 | Soybean | extracellular, plasma membrane | 53.79 | 39.89 |
| GSMUA_Achr2P01500_001 | Banana | endoplasmic reticulum, extracellular | 43.18 | 36.77 |
| VIT_02s0154g00310.t01 | Wine grape | extracellular, plasma membrane | 59.85 | 32.51 |
| GSMUA_Achr3P00830_001 | Banana | endoplasmic reticulum, plasma membrane | 46.97 | 31.63 |
| PGSC0003DMT400093516 | Potato | plastid | 53.79 | 31.0 |
| GSMUA_Achr1P26060_001 | Banana | plastid | 47.73 | 28.38 |
| CDY12951 | Canola | extracellular | 55.3 | 26.45 |
| Solyc08g078890.1.1 | Tomato | extracellular, golgi, plasma membrane | 56.82 | 25.68 |
| AT1G62500.1 | Thale cress | extracellular | 57.58 | 25.59 |
| CDY70376 | Canola | extracellular | 55.3 | 25.52 |
| Bra027040.1-P | Field mustard | extracellular | 55.3 | 23.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P26830_001 | EnsemblPlants:GSMUA_Achr4T26830_001 | EnsemblPlantsGene:GSMUA_Achr4G26830_001 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store |
| InterPro:Hydrophob_seed | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF25 | PFAM:PF14547 | SEG:seg | SMART:SM00499 |
| SUPFAM:SSF47699 | UniParc:UPI0002952FB3 | UniProt:M0SSE5 | MapMan:35.2 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G26830_001]
Coordinates
chr4:-:25934904..25935302
Molecular Weight (calculated)
13700.1 Da
IEP (calculated)
7.194
GRAVY (calculated)
0.473
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPQAFACD SCSQPSLPWP PALRRPPRVL PPVEGGGRLP GASPPATCSL DHLKLGLCLD VLGGLVHLGA GNPAENVCCP VLHGLLELEA AVCLCTAIKL
101: RILNLDIYIP LALQLLITCG KNPPSGSLCP LN
101: RILNLDIYIP LALQLLITCG KNPPSGSLCP LN
001: MGSRVLASFF VFLIFTVITL PPTIQACTPC TRPHPPVPKP PQHGGGGGGG SKPPPHHGGK GGGKPPPHGG KGGGPPHHGG GGGGGGKSPP VVRPPPVVVR
101: PPPIIRPPPV VYPPPIVRPP PITRPPIIIP PIQPPPVTTP PGLLPPITTP PGLLPPVTTP PGLLPPVTTP PGLLPPIINP PPVTVPPPSS GYPPYGPPSG
201: GGGGGGGKQP TCPINALKLG ACVDVLGGLI HIGLGNPVEN VCCPVLQGLL ELEAAVCLCT TIRLKLLNLN IFIPLALQAL ITCGINPPSG FVCPPLT
101: PPPIIRPPPV VYPPPIVRPP PITRPPIIIP PIQPPPVTTP PGLLPPITTP PGLLPPVTTP PGLLPPVTTP PGLLPPIINP PPVTVPPPSS GYPPYGPPSG
201: GGGGGGGKQP TCPINALKLG ACVDVLGGLI HIGLGNPVEN VCCPVLQGLL ELEAAVCLCT TIRLKLLNLN IFIPLALQAL ITCGINPPSG FVCPPLT
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXE7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.