Factsheet for GSMUA_Achr4P29270_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P01130_001	Banana	nucleus	68.4	66.91
GSMUA_Achr5P13120_001	Banana	nucleus	70.82	62.77
TraesCS2A01G235400.1	Wheat	nucleus	61.15	49.1
TraesCS2D01G240000.1	Wheat	nucleus	61.15	48.74
HORVU2Hr1G053260.1	Barley	nucleus	60.97	48.66
Os07t0435900-01	Rice	nucleus	61.71	48.54
TraesCS2B01G254700.1	Wheat	nucleus	60.41	48.29
EER96294	Sorghum	nucleus	60.59	45.92
VIT_05s0049g02220.t01	Wine grape	nucleus	54.09	43.3
CDX78210	Canola	nucleus	49.26	42.0
KRH07636	Soybean	nucleus	44.8	41.91
Bra007048.1-P	Field mustard	nucleus	49.07	41.84
Zm00001d005445_P001	Maize	nucleus	44.24	41.68
PGSC0003DMT400075191	Potato	nucleus	50.93	41.52
CDX73506	Canola	nucleus	48.51	41.23
Solyc12g096990.1.1	Tomato	nucleus	50.93	41.2
GSMUA_Achr6P36730_001	Banana	nucleus	45.17	41.19
PGSC0003DMT400003956	Potato	nucleus	52.97	40.95
Solyc09g090810.1.1	Tomato	nucleus	52.6	40.66
AT4G13460.2	Thale cress	nucleus	48.7	40.31
CDY23755	Canola	nucleus	45.72	38.62
CDY37735	Canola	nucleus, plastid	45.35	38.3
Bra021840.1-P	Field mustard	nucleus, plastid	45.35	38.3
AT2G33290.2	Thale cress	nucleus	46.1	38.1
KRH49479	Soybean	nucleus	48.33	36.67
KRG89164	Soybean	nucleus	48.51	36.45
Zm00001d019520_P001	Maize	nucleus	44.42	36.38
CDY19475	Canola	nucleus	36.25	35.33
CDY17156	Canola	nucleus	36.25	34.45
Bra005511.1-P	Field mustard	plastid	36.43	31.97
GSMUA_Achr5P27620_001	Banana	nucleus	33.83	29.45
GSMUA_Achr8P00490_001	Banana	nucleus	16.36	24.31
GSMUA_Achr8P00500_001	Banana	extracellular	11.9	23.44
GSMUA_Achr8P23930_001	Banana	plastid	10.78	22.05
GSMUA_Achr8P20300_001	Banana	plasma membrane	10.22	17.03
GSMUA_Achr1P20340_001	Banana	nucleus	15.99	12.11
GSMUA_Achr5P08830_001	Banana	nucleus	15.06	7.13
GSMUA_Achr5P08820_001	Banana	cytosol	1.86	4.22

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	EnsemblPlantsGene:GSMUA_Achr4G29270_001	EnsemblPlants:GSMUA_Achr4P29270_001
EnsemblPlants:GSMUA_Achr4T29270_001	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR036987	UniProt:M0ST39
PFAM:PF02182	PFAM:PF05033	PFscan:PS50867	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95
InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000296EBC3	SEG:seg

Description

Putative Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 [Source:GMGC_GENE;Acc:GSMUA_Achr4G29270_001]

Coordinates

chr4:-:27299644..27301554

Molecular Weight (calculated)

60051.6 Da

IEP (calculated)

7.533

GRAVY (calculated)

-0.207

Length

538 amino acids

Sequence
(BLAST)

001: MVPPPPPPLP SPTPFQDLNL FPIAKLEPKP EPVDGCPSQL EPLGPAEPLP PPDASPEEAA LLLDYFRRSH LFAADDDRSR HCSIVPAPVA PACSSAIVAA
101: KKRKARSAEM VRVSGIGPRD RLYFRGLVRR TRITYDSLRA LLLLRDEDRG ETFLREEAFV AAWGRRTRPD LRAAALMTDR DLWLNRDRRI IGSIPGISVG
201: DVFFFRMELC VVGLHGQVQA GIDYGVVLIY TGHGGRSQNM QRHCVNQKLE GGNLALERSM NYGIEIRVIR GIKFDGSPSG RVYVYDGLYK IVDCWMDVGK
301: SGFTVYKYKF LRMEGQEEMG SEILKLADKL KANPLSVRPV GYLSLDISRG KENLPVSIFN DIDDDRDPLM FEYLTRPILP PEAFQGKVKA DDWNGCDCTL
401: NCSAGCYCAK KNGGDFAYNR DGILLRGKSL IYECGTLCRC PPTCPNRVSQ KGVSHRLEVF RSMETGWGVR SLDLIRAGTF ICEFSGIAIT KAQAEFVLFD
501: HNVSYPHVMI FAVENIPPLR ELSVDYGIGD EIVERLTL

Best Arabidopsis Sequence Match ( AT4G13460.1 )
(BLAST)

001: MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP
101: EPEPNPYSTS DSSPSVATQR PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIYDSLRM FLMMEEAKRN GVGGRRARAD GKAGKAGSMM RDCMLWMNRD
201: KRIVGSIPGV QVGDIFFFRF ELCVMGLHGH PQSGIDFLTG SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGQGGQDRL GRQAEHQRLE GGNLAMERSM
301: YYGIEVRVIR GLKYENEVSS RVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG SSVLKFARTL KTNPLSVRPR GYINFDISNG KENVPVYLFN
401: DIDSDQEPLY YEYLAQTSFP PGLFVQQSGN ASGCDCVNGC GSGCLCEAKN SGEIAYDYNG TLIRQKPLIH ECGSACQCPP SCRNRVTQKG LRNRLEVFRS
501: LETGWGVRSL DVLHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS ARWEDWGDLS QVLADFERPS YPDIPPVDFA MDVSKMRNVA CYISHSTDPN
601: VIVQFVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVVD DWNAKLAICN

Arabidopsis Description

SUVH9Histone-lysine N-methyltransferase family member SUVH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.