Factsheet for GSMUA_Achr8P13360_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P15820_001	Banana	peroxisome	85.98	91.56
GSMUA_Achr3P14360_001	Banana	peroxisome	76.02	76.02
GSMUA_Achr1P17550_001	Banana	cytosol	14.43	63.39
GSMUA_Achr5P19120_001	Banana	cytosol, peroxisome, plastid	9.35	34.07

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	InterPro:Catalase	InterPro:Catalase_AS
InterPro:Catalase_clade1/3	InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004096	GO:GO:0004601	GO:GO:0005488	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr8G13360_001
EnsemblPlants:GSMUA_Achr8P13360_001	EnsemblPlants:GSMUA_Achr8T13360_001	InterPro:IPR018028	InterPro:IPR037060	UniProt:M0TQ39	PFAM:PF00199
PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067	ScanProsite:PS00437	ScanProsite:PS00438	PFscan:PS51402
PANTHER:PTHR11465	PANTHER:PTHR11465:SF34	SMART:SM01060	SUPFAM:SSF56634	UniParc:UPI000294C5D7	:

Description

Catalase isozyme 2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G13360_001]

Coordinates

chr8:+:10108991..10112996

Molecular Weight (calculated)

57240.5 Da

IEP (calculated)

7.188

GRAVY (calculated)

-0.595

Length

492 amino acids

Sequence
(BLAST)

001: MDPYKYRPSS NYNSPFWTTN SGAPVWNNNS SLTVGIRGPI LLEDYHLVEK LAQFDRERIP ERVVHARGAS AKGFFEVTHD VSHLTCADFL RAPGVQTPII
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLHMFSFLF DDVGVPLNYR
201: HMDGSGVHTF TLLNREGKAT YVKFHWRPTS GVKCLLEDEA VTVGGNNHSH GTQDLYDSIA AGNYPEWKLF IQTMDPEHED RFDFDPLDVT KTWPEDIFPL
301: QPVGRMVLNK NIDNFFNENE QLAFCPAIIV PGIYYSDDKL LQTRIFSYSD TQRHRLGPNY LMLPVNAPKC AHHNNHHDGF MNFMHRDEEV NYFPSRYDPV
401: RHAERFPIPS SVVTGRREKS IINKENNFKQ PGERYRSWAP DRQERFVHRW VDALSDPRVT HEIRDIWISY WSQCDKSLGQ KIATRLNVKP TM

Best Arabidopsis Sequence Match ( AT4G35090.1 )
(BLAST)

001: MDPYKYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.