Subcellular Localization
min:
: max
Winner_takes_all: plastid, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G141000.1 | Wheat | plastid | 81.82 | 88.67 |
| TraesCS1D01G139900.1 | Wheat | plastid | 80.45 | 86.34 |
| Zm00001d030537_P001 | Maize | cytosol, nucleus, plastid | 50.0 | 55.84 |
| Os10t0378450-00 | Rice | plastid | 41.82 | 47.18 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 36.82 | 20.35 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 33.64 | 19.02 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 20.91 | 8.42 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 9.09 | 6.76 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G037060.2 | EnsemblPlantsGene:HORVU1Hr1G037060 | ncoils:Coil | PANTHER:PTHR45496 | SEG:seg | UniParc:UPI000B47FC7C |
| UniProt:A0A287F5C8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:251642135..251644948
Molecular Weight (calculated)
23620.8 Da
IEP (calculated)
4.907
GRAVY (calculated)
-0.277
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: APPSFPAPLL ENPNPSRMGH FAGPSAFASA DGAFWTACPH CCYTHSYPRL YVGRRLRCPT VTCRRVFSAD ELPSTPPIVP GADMYFCTWA FFPLGPPAVA
101: EGWAPFTPFN PAPPPSPSPV PNPTAAIPGC AIPTRVRPTS RKKVGVCLKG RARVEAEQEE EEEEEKASTV ANLKAGEEVQ ADWLTLGDNG GSSGITINET
201: VDLSELGFRV DESGFLHEIP
101: EGWAPFTPFN PAPPPSPSPV PNPTAAIPGC AIPTRVRPTS RKKVGVCLKG RARVEAEQEE EEEEEKASTV ANLKAGEEVQ ADWLTLGDNG GSSGITINET
201: VDLSELGFRV DESGFLHEIP
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.