Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G191300.1 | Wheat | cytosol | 88.43 | 87.76 |
| TraesCS2A01G165100.1 | Wheat | cytosol | 88.17 | 87.72 |
| TraesCS2D01G172200.1 | Wheat | cytosol | 87.4 | 86.96 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 66.07 | 64.9 |
| KXG36712 | Sorghum | cytosol | 61.44 | 54.94 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 59.9 | 52.71 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 49.87 | 48.74 |
| GSMUA_Achr10P... | Banana | cytosol | 41.9 | 38.72 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 39.59 | 38.21 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 30.85 | 36.92 |
| HORVU1Hr1G037060.2 | Barley | cytosol, plasma membrane, plastid | 19.02 | 33.64 |
| Bra009389.1-P | Field mustard | cytosol | 19.54 | 25.94 |
| CDY69792 | Canola | cytosol | 19.54 | 25.94 |
| CDY21586 | Canola | cytosol | 19.02 | 25.61 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 19.28 | 25.34 |
| CDY31322 | Canola | cytosol | 23.91 | 24.93 |
| Bra031921.1-P | Field mustard | cytosol | 23.39 | 24.66 |
| AT5G09540.1 | Thale cress | nucleus | 17.48 | 24.29 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 26.22 | 20.99 |
| KRH42098 | Soybean | nucleus | 24.16 | 20.66 |
| Solyc07g007230.2.1 | Tomato | nucleus | 22.11 | 20.19 |
| Bra024289.1-P | Field mustard | nucleus | 23.14 | 19.61 |
| KRH49811 | Soybean | nucleus | 23.65 | 19.53 |
| AT5G64360.7 | Thale cress | nucleus | 23.14 | 19.4 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 26.22 | 18.68 |
| CDX84519 | Canola | nucleus | 22.62 | 18.53 |
| KRH10601 | Soybean | nucleus | 23.39 | 18.31 |
| CDY58269 | Canola | nucleus | 22.88 | 17.73 |
| PGSC0003DMT400079004 | Potato | cytosol | 22.11 | 16.83 |
| KRH21766 | Soybean | nucleus | 20.82 | 16.23 |
| CDY46799 | Canola | nucleus | 15.17 | 15.05 |
| Solyc11g006170.1.1 | Tomato | nucleus | 23.39 | 14.02 |
| PGSC0003DMT400073845 | Potato | cytosol | 23.14 | 13.8 |
| Solyc01g105780.2.1 | Tomato | nucleus | 24.94 | 13.53 |
| PGSC0003DMT400083794 | Potato | nucleus | 24.94 | 13.06 |
| Solyc11g006140.1.1 | Tomato | nucleus | 19.79 | 12.94 |
| CDY45966 | Canola | nucleus | 22.11 | 11.56 |
| CDY45473 | Canola | nucleus | 21.85 | 11.36 |
| Bra027007.1-P | Field mustard | nucleus | 21.59 | 11.26 |
| AT1G62970.1 | Thale cress | nucleus | 20.82 | 10.16 |
Protein Annotations
| EMBL:AK356047 | EnsemblPlants:HORVU2Hr1G030250.2 | EnsemblPlantsGene:HORVU2Hr1G030250 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45496 | PFscan:PS50076 | SEG:seg | SUPFAM:SSF46565 |
| UniParc:UPI0002004A5D | UniProt:F2CWP4 | MapMan:35.2 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CWP4]
Coordinates
chrchr2H:-:111217422..111218591
Molecular Weight (calculated)
40635.7 Da
IEP (calculated)
5.771
GRAVY (calculated)
-0.333
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSAGGGGG GEPARSLQIA AKLLAARDLV GCKRFAEHAV DADPLLPGAD ELLAVADVHL AAQRLLPSGR PDPLAILQLQ PDPDTADVKR AFRRLANLLA
101: PGRNHHPGAD TALRAVEEAF AHLSESTPTG AASAPAAPGG ASAAEDTFWT VCPHCCHVHQ YERLLVGRSL MCASAGCRRA FEATELPAAP PIVPGTDFYY
201: CAWGFIPMGF PKPADLSTDW KPFFPMPRDS SVPQPAPAAT DNFGKQNVEN NVGHSNANAP PPNGHPANKS AGGGGTVAGP PKGKIKKTAA RKKVGGGLKR
301: YASGGVESGI EPSLLGPDWS GNAEGGYTEN SRGININEVA KATDDSMMLH FGADGDIGFD LDVDASDDII GNLQNLPFLR EDDNSRRMF
101: PGRNHHPGAD TALRAVEEAF AHLSESTPTG AASAPAAPGG ASAAEDTFWT VCPHCCHVHQ YERLLVGRSL MCASAGCRRA FEATELPAAP PIVPGTDFYY
201: CAWGFIPMGF PKPADLSTDW KPFFPMPRDS SVPQPAPAAT DNFGKQNVEN NVGHSNANAP PPNGHPANKS AGGGGTVAGP PKGKIKKTAA RKKVGGGLKR
301: YASGGVESGI EPSLLGPDWS GNAEGGYTEN SRGININEVA KATDDSMMLH FGADGDIGFD LDVDASDDII GNLQNLPFLR EDDNSRRMF
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.