Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G226500.1 | Wheat | plastid | 92.35 | 93.97 |
| TraesCS2D01G237200.2 | Wheat | plastid | 92.76 | 93.84 |
| Os07t0492100-01 | Rice | plastid | 75.06 | 78.28 |
| EER97255 | Sorghum | plastid | 75.72 | 77.64 |
| Zm00001d006443_P001 | Maize | nucleus | 75.06 | 74.57 |
| GSMUA_Achr4P26310_001 | Banana | cytosol | 5.35 | 73.03 |
| Solyc03g093850.1.1 | Tomato | cytosol | 31.93 | 63.71 |
| GSMUA_Achr4P26320_001 | Banana | cytosol, mitochondrion, nucleus | 44.61 | 59.43 |
| CDY11056 | Canola | nucleus, plastid | 46.5 | 51.65 |
| CDX92677 | Canola | nucleus, plastid | 46.26 | 51.32 |
| VIT_16s0013g00300.t01 | Wine grape | nucleus | 45.02 | 50.6 |
| AT4G25120.1 | Thale cress | nucleus | 47.41 | 50.22 |
| Solyc03g093840.1.1 | Tomato | endoplasmic reticulum | 9.71 | 49.79 |
| Bra019188.1-P | Field mustard | nucleus | 46.01 | 49.04 |
| KRH33265 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 6.75 | 37.27 |
| TraesCS2B01G254500.1 | Wheat | plastid | 6.17 | 20.33 |
Protein Annotations
| Gene3D:1.10.10.160 | Gene3D:1.10.486.10 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287HZX1 | InterPro:DExx_box_DNA_helicase_dom_sf |
| InterPro:DNA_helicase_UvrD-like_C | InterPro:DNA_helicase_UvrD/REP | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003678 | GO:GO:0003824 | GO:GO:0004003 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006310 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0032508 | GO:GO:0036292 | GO:GO:0043138 | EnsemblPlantsGene:HORVU2Hr1G051300 |
| EnsemblPlants:HORVU2Hr1G051300.27 | InterPro:IPR013986 | InterPro:IPR014016 | InterPro:IPR014017 | InterPro:P-loop_NTPase | PFAM:PF00580 |
| PFAM:PF13361 | PFscan:PS51198 | PFscan:PS51217 | PANTHER:PTHR11070 | PANTHER:PTHR11070:SF2 | SUPFAM:SSF52540 |
| UniParc:UPI000B4723CF | InterPro:UvrD-like_ATP-bd | InterPro:UvrD/AddA_N | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:+:300659442..300739215
Molecular Weight (calculated)
135626.0 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.412
Length
1215 amino acids
Sequence
(BLAST)
(BLAST)
0001: QTPVASSVPQ IPSPPPQITK PSPSAISTAA MSRWKENIYP APPHYGGSSN PSRLLPCKRP LQSPCPPPRQ PLADVTVNAL QQPGPAGGVE GIDHGYITPL
0101: PKGPKSCGLL LEDDDMDEAF LLEVDAICEE HSRSMAWKDK GREKDLTVDR GPVVVAAAIH AVPECGTLDD AFWKEAYDIF EECDAQPAAK RQDEELKEMM
0201: EEESLVLSCG DDSLLPAISI ADDSVKLEDT FWEVNAISKE HHAISSEMNQ EHYATSSAIN QDEIEEVYVE DGSVALYVDF PPVISIAEEG GEVVDAFLGE
0301: VDAMSTAKGK ESGEMGLEME ENEGCAPRKY YEYLHSLNDK QREASCSDVA VPLMIVAGPG SGKTSTMVGR VLTLLKEGIS PSNILAMTFT TAAASEMRDR
0401: IGAVVGKAVA KEIIISTFHS FCLQLCRTHA EKLGRTSEFI IYGHGQQRRA IVEAERLLEH GKSDGLGDAV KQCDGDIKNS FKDKAKKWLK FVTQAKSSGQ
0501: TPEEYEKKGD LTGASILRHY NEILVSCNAL DYHDFINSSI TLLTKFPEVY KECQTTCQAI VVDEFQDTSA MQYFLLKLLA SHNHITIVGD EDQSIFSFNG
0601: ADVSGFDSFR RDFPNHKEIR LNKNYRSTRA IVEAATALIR NNTNRCHHKL VETDNPSGSK ITVKECHSED SQCAFVIDKI IETTSSSAEG RDFGKIAVLY
0701: RRQITGKAFQ VSFRNRKIPF NVHGVAFYRK KVIKAIMAIL RTTLPGCDDG PWRQALKILL PGDKEEKKKI IDHVEKISLA RKCSFISAAT DIFSAKVSGT
0801: FKRAQITQGR KVLSTLYSLS KFVEREQSVS AIISSAGNML PQQYLLEKRA VIDNDGGKLL NEDNDIRSVL QFLMDDVSDF LSTHFSSSGG ASQTEEKGCT
0901: ATLKAFIDYI SLRETENFRS RKEENKNSIT LTTIHQSKGL EWDVVFIVQV NDSEIPLLHE YNGTVKEAGC TLEEERRLFY VAMTRARKKL YILHVTIDSH
1001: RQLLPPSRFL REIPGHLLDI QGEGAAIKYH GQPSGDISFD HAEGETSTEK PIANLNETSP YPEPMQSCLA NDFLKRFEID DRAVVSHIFH HWAKKQAFQI
1101: PKRLLDKIKF VIDERLRGKG YKRKDVLCKL KSLLSDDEAL GYAEYVIKWE QIPIDKRSHL MRERQEHFQK QRIENSMGSS EPTPKQISYL RSLGCTITPT
1201: SRLHASNLIE KYKSL
0101: PKGPKSCGLL LEDDDMDEAF LLEVDAICEE HSRSMAWKDK GREKDLTVDR GPVVVAAAIH AVPECGTLDD AFWKEAYDIF EECDAQPAAK RQDEELKEMM
0201: EEESLVLSCG DDSLLPAISI ADDSVKLEDT FWEVNAISKE HHAISSEMNQ EHYATSSAIN QDEIEEVYVE DGSVALYVDF PPVISIAEEG GEVVDAFLGE
0301: VDAMSTAKGK ESGEMGLEME ENEGCAPRKY YEYLHSLNDK QREASCSDVA VPLMIVAGPG SGKTSTMVGR VLTLLKEGIS PSNILAMTFT TAAASEMRDR
0401: IGAVVGKAVA KEIIISTFHS FCLQLCRTHA EKLGRTSEFI IYGHGQQRRA IVEAERLLEH GKSDGLGDAV KQCDGDIKNS FKDKAKKWLK FVTQAKSSGQ
0501: TPEEYEKKGD LTGASILRHY NEILVSCNAL DYHDFINSSI TLLTKFPEVY KECQTTCQAI VVDEFQDTSA MQYFLLKLLA SHNHITIVGD EDQSIFSFNG
0601: ADVSGFDSFR RDFPNHKEIR LNKNYRSTRA IVEAATALIR NNTNRCHHKL VETDNPSGSK ITVKECHSED SQCAFVIDKI IETTSSSAEG RDFGKIAVLY
0701: RRQITGKAFQ VSFRNRKIPF NVHGVAFYRK KVIKAIMAIL RTTLPGCDDG PWRQALKILL PGDKEEKKKI IDHVEKISLA RKCSFISAAT DIFSAKVSGT
0801: FKRAQITQGR KVLSTLYSLS KFVEREQSVS AIISSAGNML PQQYLLEKRA VIDNDGGKLL NEDNDIRSVL QFLMDDVSDF LSTHFSSSGG ASQTEEKGCT
0901: ATLKAFIDYI SLRETENFRS RKEENKNSIT LTTIHQSKGL EWDVVFIVQV NDSEIPLLHE YNGTVKEAGC TLEEERRLFY VAMTRARKKL YILHVTIDSH
1001: RQLLPPSRFL REIPGHLLDI QGEGAAIKYH GQPSGDISFD HAEGETSTEK PIANLNETSP YPEPMQSCLA NDFLKRFEID DRAVVSHIFH HWAKKQAFQI
1101: PKRLLDKIKF VIDERLRGKG YKRKDVLCKL KSLLSDDEAL GYAEYVIKWE QIPIDKRSHL MRERQEHFQK QRIENSMGSS EPTPKQISYL RSLGCTITPT
1201: SRLHASNLIE KYKSL
0001: MENLPPNRGM WNQEYSHGRI SQSFRSAKPL LDRKRPIENA PNSSNPLPQR MKESMDTESV SHNINFNSTP LMELSANTPY KRLKPEIESY ADGHPCGLRT
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
Arabidopsis Description
SRS2ATP-dependent DNA helicase SRS2-like protein At4g25120 [Source:UniProtKB/Swiss-Prot;Acc:D1KF50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.