Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G307900.1 | Wheat | nucleus | 94.86 | 94.58 |
| TraesCS3B01G342100.1 | Wheat | nucleus | 94.56 | 94.28 |
| TraesCS3A01G295200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 94.56 | 94.28 |
| Os01t0772150-00 | Rice | nucleus | 76.74 | 75.15 |
| EES01534 | Sorghum | nucleus | 75.53 | 73.75 |
| Zm00001d006369_P002 | Maize | nucleus | 74.32 | 72.57 |
| GSMUA_Achr8P20300_001 | Banana | plasma membrane | 57.7 | 59.13 |
| VIT_08s0056g01660.t01 | Wine grape | nucleus | 53.17 | 55.17 |
| CDY50660 | Canola | nucleus | 50.15 | 49.4 |
| CDY51752 | Canola | nucleus | 49.24 | 48.51 |
| Bra031976.1-P | Field mustard | nucleus | 49.55 | 47.54 |
| PGSC0003DMT400046255 | Potato | cytosol | 46.22 | 46.65 |
| AT3G03750.2 | Thale cress | nucleus | 48.64 | 45.48 |
| KRG91550 | Soybean | nucleus | 46.83 | 44.93 |
| Solyc01g068370.2.1 | Tomato | nucleus | 45.62 | 44.28 |
| HORVU5Hr1G045170.2 | Barley | nucleus, plastid | 27.79 | 15.31 |
| HORVU7Hr1G064110.6 | Barley | nucleus, plastid | 26.28 | 14.31 |
| HORVU2Hr1G127700.1 | Barley | nucleus | 26.89 | 12.59 |
| HORVU1Hr1G068460.1 | Barley | nucleus | 25.38 | 12.46 |
| HORVU1Hr1G008690.1 | Barley | nucleus | 22.36 | 12.25 |
| HORVU2Hr1G127770.1 | Barley | nucleus | 25.68 | 12.02 |
| HORVU0Hr1G001190.1 | Barley | nucleus | 25.38 | 11.76 |
| HORVU2Hr1G053260.1 | Barley | nucleus | 23.26 | 11.42 |
| HORVU6Hr1G057990.5 | Barley | nucleus | 26.59 | 10.9 |
| HORVU3Hr1G096250.8 | Barley | golgi, mitochondrion, nucleus, plastid | 25.08 | 10.84 |
| HORVU2Hr1G107560.8 | Barley | mitochondrion, nucleus | 22.96 | 10.45 |
| HORVU4Hr1G074120.1 | Barley | nucleus | 24.17 | 9.52 |
| HORVU5Hr1G057440.1 | Barley | plastid | 26.59 | 7.57 |
| HORVU5Hr1G041830.2 | Barley | nucleus, plastid | 25.68 | 6.9 |
| HORVU1Hr1G025960.1 | Barley | nucleus, plastid | 25.38 | 6.07 |
| HORVU6Hr1G069350.6 | Barley | nucleus | 24.17 | 4.94 |
| Os04t0692900-01 | Rice | nucleus | 4.83 | 3.63 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | Gene3D:2.170.270.10 | EMBL:AK355371 | InterPro:AWS_dom | UniProt:F2CUR9 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 |
| GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | EnsemblPlantsGene:HORVU3Hr1G075380 | EnsemblPlants:HORVU3Hr1G075380.1 | InterPro:IPR001214 |
| InterPro:IPR003616 | InterPro:IPR006560 | InterPro:IPR007728 | PFAM:PF00856 | PFAM:PF05033 | PFscan:PS50280 |
| PFscan:PS50868 | PANTHER:PTHR44253 | InterPro:Post-SET_dom | InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 |
| SMART:SM00570 | SUPFAM:SSF82199 | UniParc:UPI00020048D7 | SEG:seg | : | : |
Description
Predicted protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:F2CUR9]
Coordinates
chrchr3H:-:563332489..563335510
Molecular Weight (calculated)
35022.9 Da
IEP (calculated)
7.952
GRAVY (calculated)
-0.012
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: RNPTAAGAVS ELAELVLPWL PPPDLAVAAS ASRAMRAAAS AVTARRAADS ARGLEAFPAP FVNPIDSQPY SYFIYTPFSL IPSAASFHAQ PWGCAWSRAP
101: GPTWPRPDLG LPFAGCSCAR GVCGGAGCAC ADAEAVAADP SGAGMRSLSE CGDGCACGPS CENRRTQRGV TVRLRVERQL KKGWALHAAE AIHRGQFVCE
201: YAGEFLTTEE ARRRHRLYDE LALVGKLSPA LLVIREHLPS GRVCMRVNID ATKVGNVARF INHSCDGGNL RPVLVRSSGS LLPRLCLFAA RDIVDGEELA
301: FSYGDARPSP KGLPCFCGSL CCPGVLPAEE T
101: GPTWPRPDLG LPFAGCSCAR GVCGGAGCAC ADAEAVAADP SGAGMRSLSE CGDGCACGPS CENRRTQRGV TVRLRVERQL KKGWALHAAE AIHRGQFVCE
201: YAGEFLTTEE ARRRHRLYDE LALVGKLSPA LLVIREHLPS GRVCMRVNID ATKVGNVARF INHSCDGGNL RPVLVRSSGS LLPRLCLFAA RDIVDGEELA
301: FSYGDARPSP KGLPCFCGSL CCPGVLPAEE T
001: MQRLRESPPP KTRCLGEASD IIPAADRFLR CANLILPWLN PRELAVVAQT CKTLSLISKS LTIHRSLDAA RSLENISIPF HNSIDSQRYA YFIYTPFQIP
101: ASSPPPPRQW WGAAANECGS ESRPCFDSVS ESGRFGVSLV DESGCECERC EEGYCKCLAF AGMEEIANEC GSGCGCGSDC SNRVTQKGVS VSLKIVRDEK
201: KGWCLYADQL IKQGQFICEY AGELLTTDEA RRRQNIYDKL RSTQSFASAL LVVREHLPSG QACLRINIDA TRIGNVARFI NHSCDGGNLS TVLLRSSGAL
301: LPRLCFFAAK DIIAEEELSF SYGDVSVAGE NRDDKLNCSC GSSCCLGTLP CENT
101: ASSPPPPRQW WGAAANECGS ESRPCFDSVS ESGRFGVSLV DESGCECERC EEGYCKCLAF AGMEEIANEC GSGCGCGSDC SNRVTQKGVS VSLKIVRDEK
201: KGWCLYADQL IKQGQFICEY AGELLTTDEA RRRQNIYDKL RSTQSFASAL LVVREHLPSG QACLRINIDA TRIGNVARFI NHSCDGGNLS TVLLRSSGAL
301: LPRLCFFAAK DIIAEEELSF SYGDVSVAGE NRDDKLNCSC GSSCCLGTLP CENT
Arabidopsis Description
SUVR3Histone-lysine N-methyltransferase SUVR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.