Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G467100.1 | Wheat | extracellular | 79.13 | 85.65 |
| TraesCS3B01G514500.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 68.48 | 85.37 |
| TraesCS3A01G471400.1 | Wheat | extracellular | 64.57 | 83.43 |
| HORVU3Hr1G100370.1 | Barley | vacuole | 65.65 | 66.81 |
| HORVU3Hr1G100320.1 | Barley | extracellular, golgi | 66.3 | 65.17 |
| EES04185 | Sorghum | endoplasmic reticulum, plasma membrane | 47.39 | 50.58 |
| Zm00001d042179_P001 | Maize | extracellular | 46.52 | 49.88 |
| EES10290 | Sorghum | extracellular | 39.13 | 48.65 |
| HORVU3Hr1G006450.1 | Barley | plastid | 41.52 | 48.11 |
| Zm00001d007753_P001 | Maize | extracellular | 39.57 | 47.4 |
| Os01t0937000-01 | Rice | extracellular | 39.78 | 46.33 |
| HORVU3Hr1G091680.1 | Barley | extracellular | 38.91 | 43.03 |
| HORVU3Hr1G100440.1 | Barley | cytosol, plastid | 16.74 | 42.08 |
| HORVU3Hr1G006440.1 | Barley | cytosol, nucleus, plastid | 33.7 | 41.55 |
| HORVU3Hr1G100350.2 | Barley | plastid | 39.13 | 40.91 |
| HORVU1Hr1G088620.1 | Barley | endoplasmic reticulum, extracellular, mitochondrion, plastid | 38.7 | 40.73 |
| HORVU3Hr1G100410.1 | Barley | endoplasmic reticulum, mitochondrion, plastid, vacuole | 37.39 | 39.72 |
| HORVU3Hr1G099550.1 | Barley | extracellular | 36.3 | 38.93 |
| GSMUA_Achr8P22010_001 | Banana | extracellular | 30.87 | 38.8 |
| HORVU3Hr1G097150.1 | Barley | mitochondrion, plasma membrane, plastid | 20.65 | 35.71 |
| HORVU3Hr1G100400.1 | Barley | endoplasmic reticulum, peroxisome | 33.7 | 33.33 |
| HORVU1Hr1G061380.1 | Barley | extracellular, golgi | 27.61 | 29.53 |
| Bra036172.1-P | Field mustard | extracellular, plasma membrane | 24.35 | 27.79 |
| CDY19949 | Canola | plasma membrane | 24.13 | 27.54 |
| CDY00058 | Canola | extracellular, plasma membrane | 24.13 | 27.54 |
| AT5G48430.1 | Thale cress | extracellular, plasma membrane | 23.91 | 27.09 |
Protein Annotations
| Gene3D:2.40.70.10 | MapMan:35.1 | UniProt:A0A287MHX0 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:HORVU3Hr1G100310 | EnsemblPlants:HORVU3Hr1G100310.1 | InterPro:IPR021109 |
| PFAM:PF14541 | PFAM:PF14543 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF368 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 |
| InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI000B4736DD | InterPro:Xylanase_inhibitor_I-like | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:663255237..663256945
Molecular Weight (calculated)
48493.5 Da
IEP (calculated)
7.956
GRAVY (calculated)
0.110
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: SRHAKNLASK PANIIVLPVY IRSKQCHFDA PLVHSTVQSK MCQLKYLILV AVSLCVLACT VAGDGGGRPL VTAVTKDAAT SLYTIPVKSG RPLVLDLSGP
101: IVWSTCDDGA PHDTLECNDI DCMRAHRFHP PSYGMPDVHS HYPCKCTAHP HNPVSGDTAS GDMTRVALSA NATDGINPLG PVSFTAVTSC APDSLLQGLP
201: AGAVGMAGLA RSSLAFPAQV TGTQGVASSF ALCLSSSQGN GVAIFGGGPL FVLGQPISEM LGGSTPLRKY KDSPGYYIMA SKGITVDGVK VPPGEHAPLT
301: IGLSTTIPYT ELRRDVYRPF IDAFDQAMER WGAAGLRVPS PAAAPFELCY NASKLSQTRF GFFVPRINLK LDGGWIWPVF GMNSIARVDR ATACLAFVEM
401: KAGDKAGYGG GATPAVVIGG FQMENLLLVF DEEKQTLGFT AGQHLINGRS CGQFNFTMPA
101: IVWSTCDDGA PHDTLECNDI DCMRAHRFHP PSYGMPDVHS HYPCKCTAHP HNPVSGDTAS GDMTRVALSA NATDGINPLG PVSFTAVTSC APDSLLQGLP
201: AGAVGMAGLA RSSLAFPAQV TGTQGVASSF ALCLSSSQGN GVAIFGGGPL FVLGQPISEM LGGSTPLRKY KDSPGYYIMA SKGITVDGVK VPPGEHAPLT
301: IGLSTTIPYT ELRRDVYRPF IDAFDQAMER WGAAGLRVPS PAAAPFELCY NASKLSQTRF GFFVPRINLK LDGGWIWPVF GMNSIARVDR ATACLAFVEM
401: KAGDKAGYGG GATPAVVIGG FQMENLLLVF DEEKQTLGFT AGQHLINGRS CGQFNFTMPA
001: MEKSLLVLCL ILFFTYSYVS ANYYPPKALV STVSKNTILP IFTFTLNTNQ EFFIHIGGPY LVRKCNDGLP RPIVPCGSPV CALTRRFTPH QCSLPSNKII
101: NGVCACQATA FEPFQRICNS DQFTYGDLSI SSLKPISPSV TINNVYYLCI PQPFLVDFPP GVFGLAGLAP TALATWNQLT RPRLGLEKKF ALCLPSDENP
201: LKKGAIYFGG GPYKLRNIDA RSMLSYTRLI TNPRKLNNYF LGLKGISVNG NRILFAPNAF AFDRNGDGGV TLSTIFPFTM LRSDIYRVFI EAFSQATSGI
301: PRVSSTTPFE FCLSTTTNFQ VPRIDLELAN GVIWKLSPAN AMKKVSDDVA CLAFVNGGDA AAQAVMIGIH QMENTLVEFD VGRSAFGFSS SLGLVSASCG
401: DFQTRP
101: NGVCACQATA FEPFQRICNS DQFTYGDLSI SSLKPISPSV TINNVYYLCI PQPFLVDFPP GVFGLAGLAP TALATWNQLT RPRLGLEKKF ALCLPSDENP
201: LKKGAIYFGG GPYKLRNIDA RSMLSYTRLI TNPRKLNNYF LGLKGISVNG NRILFAPNAF AFDRNGDGGV TLSTIFPFTM LRSDIYRVFI EAFSQATSGI
301: PRVSSTTPFE FCLSTTTNFQ VPRIDLELAN GVIWKLSPAN AMKKVSDDVA CLAFVNGGDA AAQAVMIGIH QMENTLVEFD VGRSAFGFSS SLGLVSASCG
401: DFQTRP
Arabidopsis Description
At5g48430 [Source:UniProtKB/TrEMBL;Acc:Q9LV70]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.