Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G156000.1 | Wheat | nucleus | 95.48 | 94.76 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 92.96 | 92.27 |
| TraesCS4A01G160900.1 | Wheat | cytosol | 89.7 | 89.25 |
| Os03t0392400-01 | Rice | nucleus | 68.84 | 67.65 |
| Zm00001d047214_P001 | Maize | extracellular | 67.09 | 67.25 |
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 65.08 | 65.4 |
| EER92178 | Sorghum | nucleus | 65.08 | 64.27 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 48.74 | 49.87 |
| GSMUA_Achr10P... | Banana | cytosol | 41.46 | 39.19 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 39.45 | 38.96 |
| HORVU1Hr1G037060.2 | Barley | cytosol, plasma membrane, plastid | 20.35 | 36.82 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 28.89 | 35.38 |
| Bra009389.1-P | Field mustard | cytosol | 22.61 | 30.72 |
| CDY69792 | Canola | cytosol | 22.61 | 30.72 |
| AT5G09540.1 | Thale cress | nucleus | 21.36 | 30.36 |
| CDY21586 | Canola | cytosol | 21.36 | 29.41 |
| CDY31322 | Canola | cytosol | 27.39 | 29.22 |
| Bra031921.1-P | Field mustard | cytosol | 26.63 | 28.73 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 30.65 | 25.1 |
| Solyc07g007230.2.1 | Tomato | nucleus | 26.38 | 24.65 |
| AT5G64360.7 | Thale cress | nucleus | 28.39 | 24.35 |
| KRH49811 | Soybean | nucleus | 28.39 | 23.99 |
| KRH42098 | Soybean | nucleus | 27.39 | 23.96 |
| Bra024289.1-P | Field mustard | nucleus | 27.39 | 23.75 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 17.09 | 22.97 |
| CDX84519 | Canola | nucleus | 26.88 | 22.53 |
| KRH21766 | Soybean | nucleus | 27.64 | 22.04 |
| CDY58269 | Canola | nucleus | 27.64 | 21.91 |
| KRH10601 | Soybean | nucleus | 27.14 | 21.73 |
| PGSC0003DMT400079004 | Potato | cytosol | 26.88 | 20.94 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 27.14 | 19.78 |
| CDY46799 | Canola | nucleus | 19.1 | 19.39 |
| Solyc11g006170.1.1 | Tomato | nucleus | 27.89 | 17.1 |
| PGSC0003DMT400073845 | Potato | cytosol | 27.14 | 16.56 |
| Solyc11g006140.1.1 | Tomato | nucleus | 24.37 | 16.3 |
| Solyc01g105780.2.1 | Tomato | nucleus | 29.15 | 16.18 |
| PGSC0003DMT400083794 | Potato | nucleus | 29.4 | 15.75 |
| CDY45966 | Canola | nucleus | 23.37 | 12.5 |
| Bra027007.1-P | Field mustard | nucleus | 23.12 | 12.33 |
| CDY45473 | Canola | nucleus | 23.12 | 12.3 |
| AT1G62970.1 | Thale cress | nucleus | 22.61 | 11.29 |
Protein Annotations
| EMBL:AK359476 | EnsemblPlants:HORVU4Hr1G039650.1 | EnsemblPlantsGene:HORVU4Hr1G039650 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45496 | PFscan:PS50076 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0002005711 | UniProt:F2D6G4 | MapMan:12.5.1.16.2 | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D6G4]
Coordinates
chrchr4H:-:303653701..303656287
Molecular Weight (calculated)
42118.5 Da
IEP (calculated)
6.401
GRAVY (calculated)
-0.342
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFSVGAGCS GDGGGEGGRV QAERWLEIAA KLLAARDLVG CKRFAERAVE ADPLLSGADE LLAVADVLLA SQAMLYTGEP DPFAVLQVPS KTTDHGAISR
101: AFRRLALLLQ SSNPHPGADV ALRIVNDAYA LLSDPSRRPL RSTPTSIPSG APSQPAAAAA EAADFWTACP FCCYVHQYPR ELVGRALKCP NESCRRGFVA
201: VEIPTQPTIV PGTEMYHCAW GFFPLGFPNS ADLGGNWKPF YKVFPWNNAP SGGGAIGRNY SNHGGGSNDR QPQNGSARGG SSRGRVKKTT ARKKVGTGPK
301: RRSFGGGVES GIDASMLGQD GWAEGEDGEG GQREEVRGIN INEEAQATDG TCRANVTGGV EDLGSFHLDV DPTEDILGNL GNLHNLPFLR VDNLGRML
101: AFRRLALLLQ SSNPHPGADV ALRIVNDAYA LLSDPSRRPL RSTPTSIPSG APSQPAAAAA EAADFWTACP FCCYVHQYPR ELVGRALKCP NESCRRGFVA
201: VEIPTQPTIV PGTEMYHCAW GFFPLGFPNS ADLGGNWKPF YKVFPWNNAP SGGGAIGRNY SNHGGGSNDR QPQNGSARGG SSRGRVKKTT ARKKVGTGPK
301: RRSFGGGVES GIDASMLGQD GWAEGEDGEG GQREEVRGIN INEEAQATDG TCRANVTGGV EDLGSFHLDV DPTEDILGNL GNLHNLPFLR VDNLGRML
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.