Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48204 | Soybean | nucleus | 13.88 | 31.87 |
| KRH15938 | Soybean | nucleus | 12.92 | 20.93 |
| KRH17159 | Soybean | nucleus | 14.35 | 20.41 |
| KRH17658 | Soybean | nucleus | 15.31 | 18.39 |
| KRH17660 | Soybean | nucleus | 15.31 | 18.39 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 16.75 | 14.71 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 13.4 | 13.66 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 13.4 | 12.96 |
| KRG90541 | Soybean | nucleus | 14.83 | 11.97 |
| KRG94080 | Soybean | nucleus | 14.83 | 10.76 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 15.31 | 10.74 |
| KRH18108 | Soybean | nucleus | 14.35 | 9.62 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 13.88 | 8.61 |
| KRH48200 | Soybean | nucleus | 14.83 | 8.05 |
| KRH42774 | Soybean | nucleus | 12.92 | 6.87 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | UniProt:A0A287PHI0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU4Hr1G068410 | EnsemblPlants:HORVU4Hr1G068410.1 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR44042 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI000B4689DD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:565571179..565572224
Molecular Weight (calculated)
22778.4 Da
IEP (calculated)
7.630
GRAVY (calculated)
-0.982
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: EMPPEWDLQQ GAGHALTGGE PAVVAVGYGE RTGGKEDAGA PADGEAASAG AGVGEGAGAR ARSAGGDMLG TTRKRGRKTK DSAQEKNRAV PWTPDEHRLF
101: LAGIREHGVG KWQKLAREFV KTRNASQIAS HYQKYSIRQQ KLRRNECKRP SIHDINDEDT RSLPASSQLQ LQAKLRVDDE SAGEDEGRLS EFGPRNEMQN
201: EDLNFKNCI
101: LAGIREHGVG KWQKLAREFV KTRNASQIAS HYQKYSIRQQ KLRRNECKRP SIHDINDEDT RSLPASSQLQ LQAKLRVDDE SAGEDEGRLS EFGPRNEMQN
201: EDLNFKNCI
001: MEVMRPSTSH VSGGNWLMEE TKSGVAASGE GATWTAAENK AFENALAVYD DNTPDRWQKV AAVIPGKTVS DVIRQYNDLE ADVSSIEAGL IPVPGYITSP
101: PFTLDWAGGG GGCNGFKPGH QVCNKRSQAG RSPELERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ LSGGKDKRRA
201: SIHDITTVNL EEEASLETNK SSIVVGDQRS RLTAFPWNQT DNNGTQADAF NITIGNAISG VHSYGQVMIG GYNNADSCYD AQNTMFQL
101: PFTLDWAGGG GGCNGFKPGH QVCNKRSQAG RSPELERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ LSGGKDKRRA
201: SIHDITTVNL EEEASLETNK SSIVVGDQRS RLTAFPWNQT DNNGTQADAF NITIGNAISG VHSYGQVMIG GYNNADSCYD AQNTMFQL
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q9FIL9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.