Factsheet for HORVU4Hr1G087630.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G138300.1	Wheat	endoplasmic reticulum	98.8	98.8
TraesCS4B01G365100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	98.4	98.4
HORVU4Hr1G087560.1	Barley	cytosol	18.6	97.89
TraesCS5A01G534000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	98.0	97.8
EER98460	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	88.0	87.82
Zm00001d009858_P002	Maize	plasma membrane	87.6	87.43
Os05t0320700-02	Rice	plasma membrane	86.0	86.0
Zm00001d037849_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	86.4	85.21
GSMUA_Achr7P18320_001	Banana	extracellular, golgi	73.6	76.51
GSMUA_Achr6P08670_001	Banana	mitochondrion	55.4	75.89
GSMUA_Achr9P04840_001	Banana	extracellular	69.8	75.87
GSMUA_Achr10P...	Banana	cytosol	51.6	73.93
HORVU3Hr1G080830.1	Barley	endoplasmic reticulum	74.6	73.86
HORVU3Hr1G025920.2	Barley	plastid	72.2	58.7
HORVU7Hr1G093630.1	Barley	mitochondrion, plastid	60.8	55.07

Protein Annotations

Gene3D:1.10.630.10	MapMan:9.2.1.2	UniProt:A0A287Q0P3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	EnsemblPlantsGene:HORVU4Hr1G087630	EnsemblPlants:HORVU4Hr1G087630.1	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF65	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI000B486F4C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:637603403..637606992

Molecular Weight (calculated)

56857.6 Da

IEP (calculated)

9.796

GRAVY (calculated)

-0.135

Length

500 amino acids

Sequence
(BLAST)

001: MDVNLLEKAL LGLFAAALLA IAVAKLTGKR FRLPPGPSGA PIVGNWLQVG DDLNHRNLMG MAKRFGEVFL LRMGVRNLVV VSSPELAKEV LHTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGDHWRKMR RIMTVPFFTN KVVAQNRVGW EEEARLVVED LKADPASATG VVIRRRLQLM MYNDMFRIMF DRRFESLADP
201: LFNKLRALNA ERSILSQSFD YNYGDFIPIL RPFLRGYLNR CTNLKAKRMK VFEEDFVQER KKALEKNGEI RCAMDHILEA ERKGEINHDN VLYIVENINV
301: AAIETTLWSI EWGVAELVNH PNIQSKLRQE IAAVLGPDAA VTEPDLERLP YLQAVVKETL RLRMAIPLLV PHMNLKDAKL TGYDIPAESK ILVNAWFLAN
401: DPKRWVRADE FRPERFLEEE RAVEANGNDF RFVPFGVGRR SCPGIILALP IIGITLGRLV QNFQLLPPLG KDKIDTTEKP GQFSNQIRNH ATVVCKPLKA

Best Arabidopsis Sequence Match ( AT2G30490.1 )
(BLAST)

001: MDLLLLEKSL IAVFVAVILA TVISKLRGKK LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPDLTKEV LLTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC

Arabidopsis Description

CYP73A5Cinnamate-4-hydroxylase [Source:UniProtKB/TrEMBL;Acc:B1GV49]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.