Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G079270.1 | Barley | cytosol | 19.1 | 9.8 |
| HORVU2Hr1G058820.21 | Barley | plasma membrane | 20.79 | 5.32 |
| HORVU5Hr1G048950.2 | Barley | plasma membrane | 24.72 | 4.77 |
| HORVU2Hr1G048130.1 | Barley | mitochondrion | 7.3 | 4.69 |
| HORVU3Hr1G117680.4 | Barley | plasma membrane | 23.6 | 4.31 |
| HORVU2Hr1G068330.1 | Barley | cytosol | 0.56 | 0.35 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G006430.5 | EnsemblPlantsGene:HORVU5Hr1G006430 | InterPro:Malectin-like_Carb-bd_dom | PANTHER:PTHR27003 | PANTHER:PTHR27003:SF141 | PFAM:PF12819 |
| SEG:seg | UniParc:UPI000B46A298 | UniProt:A0A287Q9F8 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:11397883..11400051
Molecular Weight (calculated)
18638.2 Da
IEP (calculated)
11.751
GRAVY (calculated)
-0.396
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXRPAPPPD SSAPLPLLST DRLLLAPGHH VATSHLLHLR PDASRWVSPG HGVGEEGLGD AEDGVLWRRL TREAVVLAQS STVSVCLSNA TTGRPFISTL
101: ELRPLNGSLY RTDGEARAFL ALAARINSGA PLPDPATRPR RRAPVKREGG DAGRGKRSPV LLCPFPSSAK RSRSTRPS
101: ELRPLNGSLY RTDGEARAFL ALAARINSGA PLPDPATRPR RRAPVKREGG DAGRGKRSPV LLCPFPSSAK RSRSTRPS
001: MVRISLLLLC LLVSTCLFTS SSAQAPGFVS LDCGGAEPFT DELGLKWSPD NHLIYGETAN ISSVNETRTQ YTTLRHFPAD SRKYCYTLNV TSRNRYLIRA
101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE
201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF
301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP
401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT
501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSAELT NRPLPIQRVS STLSEAHGDA AHCFTLYEIE
601: EATKKFEKRI GSGGFGIVYY GKTREGKEIA VKVLANNSYQ GKREFANEVT LLSRIHHRNL VQFLGYCQEE GKNMLVYEFM HNGTLKEHLY GVVPRDRRIS
701: WIKRLEIAED AARGP
101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE
201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF
301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP
401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT
501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSAELT NRPLPIQRVS STLSEAHGDA AHCFTLYEIE
601: EATKKFEKRI GSGGFGIVYY GKTREGKEIA VKVLANNSYQ GKREFANEVT LLSRIHHRNL VQFLGYCQEE GKNMLVYEFM HNGTLKEHLY GVVPRDRRIS
701: WIKRLEIAED AARGP
Arabidopsis Description
Leucine-rich repeat protein kinase family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGM1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.