Factsheet for HORVU5Hr1G033480.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G118800.1	Wheat	plastid	74.38	98.76
TraesCS5A01G121000.1	Wheat	cytosol	74.06	98.34
TraesCS5B01G111400.1	Wheat	cytosol	74.06	98.34
Os11t0312220-00	Rice	mitochondrion	68.44	90.12
Os11t0312400-01	Rice	cytosol	68.44	90.12
EES16935	Sorghum	cytosol	67.5	89.63
EES15893	Sorghum	cytosol	67.5	89.63
EES01149	Sorghum	cytosol	67.5	89.63
Zm00001d041112_P002	Maize	plastid	66.88	88.8
Zm00001d024051_P001	Maize	plastid	65.94	87.55
GSMUA_Achr10P...	Banana	cytosol	66.56	86.94
GSMUA_Achr6P12440_001	Banana	cytosol	64.06	85.42
CDY41515	Canola	cytosol	59.38	79.17
CDX84406	Canola	cytosol	59.38	79.17
CDY48140	Canola	cytosol	59.06	78.75
Bra038628.1-P	Field mustard	cytosol	59.06	78.75
AT5G63400.1	Thale cress	cytosol	60.31	78.46
CDY16727	Canola	cytosol	58.75	78.33
Bra035847.1-P	Field mustard	cytosol	58.75	78.33
Zm00001d016303_P001	Maize	cytosol	44.69	76.88
HORVU7Hr1G090950.1	Barley	plastid	76.56	75.62
CDX83159	Canola	cytosol	57.81	75.51
Bra000623.1-P	Field mustard	cytosol	57.81	75.51
CDY34035	Canola	cytosol	57.5	75.1
AT5G50370.1	Thale cress	cytosol	57.81	74.6
Zm00001d044103_P004	Maize	extracellular	69.38	72.31
HORVU7Hr1G077220.1	Barley	mitochondrion, plastid	22.19	28.86
HORVU7Hr1G077170.5	Barley	mitochondrion, plastid	24.38	26.9
HORVU3Hr1G036340.1	Barley	cytosol	8.44	25.0
HORVU2Hr1G029350.10	Barley	endoplasmic reticulum	17.19	24.55
HORVU4Hr1G032400.1	Barley	cytosol	6.56	24.14
HORVU1Hr1G057070.1	Barley	endoplasmic reticulum, extracellular	9.38	24.0
HORVU2Hr1G121070.1	Barley	mitochondrion	20.0	22.61
HORVU2Hr1G005480.2	Barley	mitochondrion	16.88	22.22
HORVU4Hr1G082290.2	Barley	plastid	22.5	21.11
HORVU3Hr1G026180.16	Barley	mitochondrion	18.75	20.07
HORVU7Hr1G034340.5	Barley	cytosol, nucleus, plastid	18.75	15.31
HORVU6Hr1G014480.2	Barley	plastid	25.94	13.07

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	Gene3D:3.40.50.300	MapMan:6.1.3.1	UniProt:A0A287QTX4	InterPro:Adenyl_kin_sub
InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	InterPro:Adenylate_kinase_lid-dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004017	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016776
GO:GO:0019205	GO:GO:0046940	EnsemblPlantsGene:HORVU5Hr1G033480	EnsemblPlants:HORVU5Hr1G033480.2	HAMAP:MF_00235	InterPro:P-loop_NTPase
PFAM:PF00406	PFAM:PF05191	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF22
SUPFAM:SSF52540	TIGRFAMs:TIGR01351	UniParc:UPI000B46E72B	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:224777854..224832890

Molecular Weight (calculated)

34998.0 Da

IEP (calculated)

8.318

GRAVY (calculated)

-0.476

Length

320 amino acids

Sequence
(BLAST)

001: RVTRKAGRQQ REIGLAFGRR TPRQARESSV AAEEEMATTT TIEDVPSAGR QQREIGLAFG RRTPRQARES SVAAEEEMAT TTTIEDVPSV ELMTELLRRA
101: KCSSKPDKRI ILVGPPGSGK GTQSPLIKDE YCLCHLATGD MLRAAVAAKT PLGIKAKEAM DKGELVSDDL VVGIIDEAMK KPSCQKGFIL DGFPRTVVQA
201: QKLDEMLAKQ GAKVDKVLNF AIDDAILEER ITGRLIHPSS GRSYHTKFAP PKTPGVDDVS GEPLIQRKDD TSEVLKSRLE AFHIQTEPVI DYYSKNGLVA
301: NLHAEKPPKE VTAEVQKALS

Best Arabidopsis Sequence Match ( AT5G63400.1 )
(BLAST)

001: MATGGAAADL EDVQTVDLMS ELLRRLKCSQ KPDKRLIFIG PPGSGKGTQS PVVKDEYCLC HLSTGDMLRA AVASKTPLGV KAKEAMEKGE LVSDDLVVGI
101: IDEAMNKPKC QKGFILDGFP RTVTQAEKLD EMLKRRGTEI DKVLNFAIDD AILEERITGR WIHPSSGRSY HTKFAPPKTP GVDDITGEPL IQRKDDNADV
201: LKSRLAAFHS QTQPVIDYYA KKAVLTNIQA EKAPQEVTSE VKKALS

Arabidopsis Description

ADK1ADK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.