Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G042160.2 | Barley | golgi | 100.0 | 17.0 |
| HORVU5Hr1G044460.3 | Barley | extracellular, mitochondrion, plasma membrane | 7.06 | 1.02 |
| HORVU4Hr1G067950.8 | Barley | extracellular, plasma membrane | 7.06 | 0.91 |
| HORVU6Hr1G020720.4 | Barley | extracellular, golgi | 4.71 | 0.84 |
| HORVU6Hr1G084860.2 | Barley | extracellular, mitochondrion | 4.71 | 0.8 |
| HORVU3Hr1G034460.15 | Barley | extracellular | 4.71 | 0.74 |
| HORVU3Hr1G078360.9 | Barley | plastid | 5.88 | 0.71 |
| HORVU2Hr1G072700.1 | Barley | endoplasmic reticulum, extracellular | 3.53 | 0.68 |
| HORVU2Hr1G072690.2 | Barley | endoplasmic reticulum, extracellular | 3.53 | 0.67 |
| HORVU3Hr1G076060.1 | Barley | extracellular, plasma membrane, vacuole | 3.53 | 0.64 |
| HORVU5Hr1G083340.4 | Barley | extracellular | 3.53 | 0.55 |
| HORVU1Hr1G004650.3 | Barley | cytosol, mitochondrion | 2.35 | 0.48 |
| HORVU2Hr1G127440.1 | Barley | cytosol, mitochondrion | 2.35 | 0.47 |
| HORVU5Hr1G076200.1 | Barley | extracellular, mitochondrion, peroxisome | 3.53 | 0.47 |
| HORVU5Hr1G042180.3 | Barley | extracellular, plastid | 2.35 | 0.46 |
| HORVU5Hr1G076250.1 | Barley | plastid | 3.53 | 0.45 |
| HORVU4Hr1G080390.1 | Barley | extracellular | 2.35 | 0.44 |
| HORVU5Hr1G110380.2 | Barley | extracellular | 2.35 | 0.43 |
| HORVU5Hr1G022790.2 | Barley | extracellular | 2.35 | 0.43 |
| HORVU7Hr1G054090.6 | Barley | plasma membrane | 2.35 | 0.32 |
| HORVU1Hr1G087010.1 | Barley | extracellular, plasma membrane | 2.35 | 0.32 |
| HORVU5Hr1G020400.5 | Barley | extracellular | 1.18 | 0.16 |
| HORVU5Hr1G055570.4 | Barley | cytosol, extracellular | 0.0 | 0.0 |
| HORVU5Hr1G106400.1 | Barley | extracellular, mitochondrion, peroxisome | 0.0 | 0.0 |
| HORVU4Hr1G085050.3 | Barley | plastid | 0.0 | 0.0 |
| HORVU2Hr1G112450.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU2Hr1G112330.3 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
| HORVU7Hr1G115510.1 | Barley | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G042140.1 | EnsemblPlantsGene:HORVU5Hr1G042140 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | TMHMM:TMhelix |
| UniParc:UPI000B47B3DA | UniProt:A0A287QYP6 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:321017999..321077193
Molecular Weight (calculated)
8951.3 Da
IEP (calculated)
9.758
GRAVY (calculated)
0.942
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MCAAFRVAAS LIRVLYHVAA GSVLGVARVL FAAANERCLR CMSQAALGRS VTGTFCGDLL VGAMAQSWRV LMQGLTSLVF LCARA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.