Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P17100_001 | Banana | cytosol | 42.0 | 39.25 |
| KRH66218 | Soybean | cytosol | 34.0 | 28.33 |
| HORVU5Hr1G024040.1 | Barley | cytosol | 79.0 | 22.83 |
| PGSC0003DMT400028517 | Potato | cytosol | 35.0 | 21.21 |
| HORVU2Hr1G010270.1 | Barley | cytosol, peroxisome | 64.0 | 18.44 |
| HORVU2Hr1G010250.1 | Barley | cytosol | 59.0 | 16.76 |
| HORVU2Hr1G115460.2 | Barley | cytosol | 37.0 | 14.68 |
| HORVU7Hr1G075560.3 | Barley | cytosol | 36.0 | 14.29 |
| HORVU3Hr1G090120.1 | Barley | mitochondrion | 33.0 | 13.98 |
| HORVU3Hr1G090050.28 | Barley | plastid | 45.0 | 11.81 |
| HORVU3Hr1G015640.7 | Barley | cytosol, mitochondrion, peroxisome | 41.0 | 10.99 |
| HORVU3Hr1G015680.3 | Barley | cytosol, peroxisome | 39.0 | 10.8 |
| HORVU7Hr1G083970.1 | Barley | cytosol | 35.0 | 10.23 |
| HORVU2Hr1G028990.1 | Barley | plastid | 13.0 | 6.95 |
| HORVU5Hr1G068630.9 | Barley | plastid | 26.0 | 3.98 |
| HORVU2Hr1G115450.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G052270.1 | EnsemblPlantsGene:HORVU5Hr1G052270 | Gene3D:3.90.180.10 | InterPro:GroES-like_sf | PANTHER:PTHR43205 | PANTHER:PTHR43205:SF14 |
| PFAM:PF16884 | SUPFAM:SSF50129 | UniParc:UPI000B466BE3 | UniProt:A0A287R878 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:-:408982734..408983227
Molecular Weight (calculated)
11077.3 Da
IEP (calculated)
4.666
GRAVY (calculated)
-0.031
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MAAAAEVSNK GVILKQFVTG FPTEDDMEVV TGAVRLAVPP GSASVMVKNL YVSCDPYMRN RMSEHNEASY IEQFVPGEVP YSYPTRPLFP TSYQCLGYFL
001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE
Arabidopsis Description
Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.