Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0463700-01 | Rice | nucleus | 38.51 | 30.65 |
| KXG35797 | Sorghum | nucleus | 36.82 | 28.39 |
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 48.65 | 27.32 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 49.66 | 26.92 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 47.64 | 26.76 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 47.64 | 26.7 |
| Zm00001d020762_P001 | Maize | nucleus | 36.82 | 24.77 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 25.68 | 23.38 |
| AT5G09540.1 | Thale cress | nucleus | 21.28 | 22.5 |
| CDY21586 | Canola | cytosol | 19.26 | 19.72 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 25.34 | 19.28 |
| Bra009389.1-P | Field mustard | cytosol | 18.92 | 19.11 |
| CDY69792 | Canola | cytosol | 18.92 | 19.11 |
| GSMUA_Achr10P... | Banana | cytosol | 26.69 | 18.76 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 25.34 | 18.61 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 22.97 | 17.09 |
| CDY31322 | Canola | cytosol | 20.27 | 16.09 |
| Bra031921.1-P | Field mustard | cytosol | 19.93 | 15.99 |
| AT5G64360.7 | Thale cress | nucleus | 24.32 | 15.52 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 24.66 | 15.02 |
| CDX84519 | Canola | nucleus | 22.64 | 14.11 |
| KRH42098 | Soybean | nucleus | 21.28 | 13.85 |
| Bra024289.1-P | Field mustard | nucleus | 21.28 | 13.73 |
| KRH49811 | Soybean | nucleus | 21.62 | 13.59 |
| Solyc07g007230.2.1 | Tomato | nucleus | 19.26 | 13.38 |
| CDY58269 | Canola | nucleus | 20.95 | 12.35 |
| KRH10601 | Soybean | nucleus | 19.59 | 11.67 |
| KRH21766 | Soybean | nucleus | 19.59 | 11.62 |
| PGSC0003DMT400079004 | Potato | cytosol | 19.59 | 11.35 |
| Solyc11g006170.1.1 | Tomato | nucleus | 21.96 | 10.02 |
| Solyc11g006140.1.1 | Tomato | nucleus | 19.93 | 9.92 |
| PGSC0003DMT400073845 | Potato | cytosol | 21.62 | 9.82 |
| Bra027007.1-P | Field mustard | nucleus | 22.97 | 9.12 |
| HORVU1Hr1G037060.2 | Barley | cytosol, plasma membrane, plastid | 6.76 | 9.09 |
| CDY46799 | Canola | nucleus | 11.82 | 8.93 |
| CDY45966 | Canola | nucleus | 22.3 | 8.87 |
| CDY45473 | Canola | nucleus | 22.3 | 8.82 |
| AT1G62970.1 | Thale cress | nucleus | 22.64 | 8.41 |
| Solyc01g105780.2.1 | Tomato | nucleus | 19.26 | 7.95 |
| PGSC0003DMT400083794 | Potato | nucleus | 19.93 | 7.94 |
Protein Annotations
| EMBL:AK374423 | EnsemblPlants:HORVU5Hr1G055620.1 | EnsemblPlantsGene:HORVU5Hr1G055620 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45496 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI000B46977E | UniProt:A0A287RAG6 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:436460779..436464875
Molecular Weight (calculated)
32492.8 Da
IEP (calculated)
11.853
GRAVY (calculated)
-0.759
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: QFGHQRKKRS IPNSSSTEPS IPPSTKQWIR RRHADKWMSV AEKLLMARDL EGCKEFSSHA IAADPRTPGA EDLYAAADVL LASQRRRLPS GQPDPYAVLG
101: LDPANPASRH PDVVHPKFRR LSLLLNRSHP DRPCSVYIAE AARLVADAWA FLSNTALKSA LDAELDAVVA PRAPMPQPAV ERRPQPSPPP QQSPVWAVPL
201: PRPPPQRIPV RPAPQPTPPP QPTRLQAATQ PSPPPQPSSM RAATQTPPPP QPSSMRAATQ TPPPPQSTSL RVATQTPPTP QPSRRNQLRR HSRLHI
101: LDPANPASRH PDVVHPKFRR LSLLLNRSHP DRPCSVYIAE AARLVADAWA FLSNTALKSA LDAELDAVVA PRAPMPQPAV ERRPQPSPPP QQSPVWAVPL
201: PRPPPQRIPV RPAPQPTPPP QPTRLQAATQ PSPPPQPSSM RAATQTPPPP QPSSMRAATQ TPPPPQSTSL RVATQTPPTP QPSRRNQLRR HSRLHI
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.