Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 79.3 | 82.16 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 79.3 | 82.16 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 75.82 | 78.41 |
| Os09t0463700-01 | Rice | nucleus | 41.03 | 60.22 |
| KXG35797 | Sorghum | nucleus | 38.1 | 54.17 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 26.92 | 49.66 |
| Zm00001d020762_P001 | Maize | nucleus | 39.38 | 48.86 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 18.86 | 31.69 |
| AT5G09540.1 | Thale cress | nucleus | 14.29 | 27.86 |
| GSMUA_Achr10P... | Banana | cytosol | 21.43 | 27.79 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 19.78 | 27.14 |
| CDY21586 | Canola | cytosol | 14.29 | 26.99 |
| Bra009389.1-P | Field mustard | cytosol | 14.1 | 26.28 |
| CDY69792 | Canola | cytosol | 14.1 | 26.28 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 18.68 | 26.22 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 19.05 | 25.81 |
| Bra031921.1-P | Field mustard | cytosol | 15.75 | 23.31 |
| CDY31322 | Canola | cytosol | 15.75 | 23.06 |
| KRH42098 | Soybean | nucleus | 18.13 | 21.76 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 18.68 | 20.99 |
| HORVU1Hr1G037060.2 | Barley | cytosol, plasma membrane, plastid | 8.42 | 20.91 |
| AT5G64360.7 | Thale cress | nucleus | 17.77 | 20.91 |
| Solyc07g007230.2.1 | Tomato | nucleus | 15.93 | 20.42 |
| KRH49811 | Soybean | nucleus | 17.58 | 20.38 |
| KRH10601 | Soybean | nucleus | 18.5 | 20.32 |
| Bra024289.1-P | Field mustard | nucleus | 16.12 | 19.17 |
| CDX84519 | Canola | nucleus | 16.48 | 18.95 |
| KRH21766 | Soybean | nucleus | 17.03 | 18.64 |
| CDY58269 | Canola | nucleus | 16.12 | 17.53 |
| PGSC0003DMT400079004 | Potato | cytosol | 16.3 | 17.42 |
| CDY45473 | Canola | nucleus | 22.71 | 16.58 |
| CDY45966 | Canola | nucleus | 22.53 | 16.53 |
| Bra027007.1-P | Field mustard | nucleus | 22.16 | 16.22 |
| CDY46799 | Canola | nucleus | 11.17 | 15.56 |
| Solyc11g006170.1.1 | Tomato | nucleus | 18.13 | 15.25 |
| PGSC0003DMT400073845 | Potato | cytosol | 18.13 | 15.18 |
| Solyc11g006140.1.1 | Tomato | nucleus | 16.48 | 15.13 |
| PGSC0003DMT400083794 | Potato | nucleus | 19.41 | 14.27 |
| AT1G62970.1 | Thale cress | nucleus | 20.33 | 13.93 |
| Solyc01g105780.2.1 | Tomato | nucleus | 17.58 | 13.39 |
Protein Annotations
| EMBL:AK374423 | EnsemblPlants:HORVU5Hr1G069570.1 | EnsemblPlantsGene:HORVU5Hr1G069570 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR45496 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI0002008F4A |
| UniProt:F2EE47 | MapMan:35.2 | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EE47]
Coordinates
chrchr5H:-:523275516..523278640
Molecular Weight (calculated)
58030.7 Da
IEP (calculated)
10.033
GRAVY (calculated)
-0.480
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAAAAARR QADKWMSVAE KLLMARDLEG CKEFSSQAIA ADPRTPGAED LYAAADVLLA SQRRRLPSGQ PDPYAVLGLD PANPASRHPD VVHPKFRRLS
101: LLLNRSHPDR PCSVYIAEAA RLVADAWAFL SNAALKSALD AELDAAAAPR APMQQPAVER RPQPSPPPQQ SPVWAVPLPR PPPQRIPVRP APQPTPPPQP
201: TRLQAATQPS RPPQPSSMRA ATQTPPPPQP SSLRAATQTP PPTQPSSLRA ATQTPPLPQP SPPQPATQAQ PPPHLSPLRA ATKLPPSPQP SPLQPATQPP
301: PPPQPSLLQA ASQPPAGATA PPVEAATLPA STFWTLCKGC SHIHQYDRLY EARKLKCSSC HQPFVAEAMA EPPPIVPGTD MYYCTWGFFP IGFPGCPGFA
401: DLVNSQPQGS GQLSVPWLGA NGGMEANGKV AAENGTPITI GAAGKETVSS EPSPEPLMHM EVEVPLVTEP APEPLMRMRV GVPAVPEPVM PTRVEVPASP
501: QPVMPTRVEV PAALEPVQRT RVSSVKVGAK KRGRPKGSKN KNKKKL
101: LLLNRSHPDR PCSVYIAEAA RLVADAWAFL SNAALKSALD AELDAAAAPR APMQQPAVER RPQPSPPPQQ SPVWAVPLPR PPPQRIPVRP APQPTPPPQP
201: TRLQAATQPS RPPQPSSMRA ATQTPPPPQP SSLRAATQTP PPTQPSSLRA ATQTPPLPQP SPPQPATQAQ PPPHLSPLRA ATKLPPSPQP SPLQPATQPP
301: PPPQPSLLQA ASQPPAGATA PPVEAATLPA STFWTLCKGC SHIHQYDRLY EARKLKCSSC HQPFVAEAMA EPPPIVPGTD MYYCTWGFFP IGFPGCPGFA
401: DLVNSQPQGS GQLSVPWLGA NGGMEANGKV AAENGTPITI GAAGKETVSS EPSPEPLMHM EVEVPLVTEP APEPLMRMRV GVPAVPEPVM PTRVEVPASP
501: QPVMPTRVEV PAALEPVQRT RVSSVKVGAK KRGRPKGSKN KNKKKL
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.