Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0087g00430.t01 | Wine grape | nucleus | 75.81 | 33.33 |
| HORVU4Hr1G000540.1 | Barley | mitochondrion | 59.68 | 28.68 |
| HORVU3Hr1G022940.3 | Barley | plastid | 33.87 | 12.65 |
| HORVU0Hr1G040070.2 | Barley | cytosol, mitochondrion | 45.16 | 10.0 |
| HORVU7Hr1G088980.1 | Barley | cytosol, nucleus | 50.0 | 7.89 |
| HORVU6Hr1G081650.1 | Barley | cytosol, nucleus, plastid | 48.39 | 7.87 |
| HORVU3Hr1G026420.2 | Barley | plastid | 25.81 | 3.66 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G015520.1 | EnsemblPlantsGene:HORVU6Hr1G015520 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009742 | GO:GO:0009987 | InterPro:BES1_N | InterPro:BZR | PANTHER:PTHR31506 | PFAM:PF05687 |
| SEG:seg | MapMan:11.3.2.4 | MapMan:15.5.39 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:34710534..34710720
Molecular Weight (calculated)
6522.9 Da
IEP (calculated)
12.199
GRAVY (calculated)
-0.410
Length
62 amino acids
Sequence
(BLAST)
(BLAST)
1: XQRRAITSRM LAGLRQHGNF PLPARADMND VLAALARAAG WTVHPDGTTF LSSPQPPPPP PP
001: MWEQHRSEQL HRTKMHTLNN TITTTTGSQD PNLDPIPDPD QFPNRNRNQP QSRRPRGFAA AAAAASIAPT ENDVNNGNIA GIGGGEGSSG GGGGGGGKGK
101: REREKEKERT KLRERHRRAI TSRMLAGLRQ YGNFPLPARA DMNDVIAALA REAGWSVEAD GTTYRQSQQP NHVVQFPTRS IESPLSSSTL KNCAKAAIES
201: QQHSVLRNDE KLAPVSLDSI GIAESDHPGN GRYTSVSPIT SVGCLEANQL IQDVHSAEQC NDFTESFYVP VYAMLPVGII DNFGQLVDPE GVRQELSYMK
301: SLNVDGVVID CWWGIVEGWN PQKYVWSGYR ELFNLIRDFK LKLQVVMAFH EYGGNASGNV MISLPQWVLK IGKDNPDIFF TDREGRRSFE CLNWSIDKER
401: VLHGRTGIEV YFDFMRSFRS EFDDLFVEGL ITAVEIGLGA SGELKYPSFP ERMGWIYPGI GEFQCYDKYS QLSLQKEAKS RGFTFWGKGP ENAGQYSSHP
501: HETVFFQERG EYDSYYGRFF LNWYSQLLIG HAENVLSLAN LAFEETKIIV KIPAIYWSYK TASHAAELTA GYYNPSNRDG YSLVFETLKK YSVTVKFVCP
601: GPQMSPNAHE EALADPEGLS WQVINAAWDK GLQIGGENAI TCFDRDGCMR LIDIAKPRNH PDGYHFSFFT YRQPSPLVQG STCFPDLDYF IKRMHGDIRD
701: KQF
101: REREKEKERT KLRERHRRAI TSRMLAGLRQ YGNFPLPARA DMNDVIAALA REAGWSVEAD GTTYRQSQQP NHVVQFPTRS IESPLSSSTL KNCAKAAIES
201: QQHSVLRNDE KLAPVSLDSI GIAESDHPGN GRYTSVSPIT SVGCLEANQL IQDVHSAEQC NDFTESFYVP VYAMLPVGII DNFGQLVDPE GVRQELSYMK
301: SLNVDGVVID CWWGIVEGWN PQKYVWSGYR ELFNLIRDFK LKLQVVMAFH EYGGNASGNV MISLPQWVLK IGKDNPDIFF TDREGRRSFE CLNWSIDKER
401: VLHGRTGIEV YFDFMRSFRS EFDDLFVEGL ITAVEIGLGA SGELKYPSFP ERMGWIYPGI GEFQCYDKYS QLSLQKEAKS RGFTFWGKGP ENAGQYSSHP
501: HETVFFQERG EYDSYYGRFF LNWYSQLLIG HAENVLSLAN LAFEETKIIV KIPAIYWSYK TASHAAELTA GYYNPSNRDG YSLVFETLKK YSVTVKFVCP
601: GPQMSPNAHE EALADPEGLS WQVINAAWDK GLQIGGENAI TCFDRDGCMR LIDIAKPRNH PDGYHFSFFT YRQPSPLVQG STCFPDLDYF IKRMHGDIRD
701: KQF
Arabidopsis Description
BMY2beta-amylase 2 [Source:TAIR;Acc:AT5G45300]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.