Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G015230.1 | Barley | endoplasmic reticulum | 57.99 | 61.48 |
| TraesCS5A01G036400.1 | Wheat | cytosol, plastid | 44.77 | 60.04 |
| TraesCS5D01G044600.1 | Wheat | cytosol, plastid | 36.63 | 59.86 |
| Os12t0209901-01 | Rice | cytosol, nucleus | 37.35 | 55.27 |
| TraesCS5B01G037000.1 | Wheat | plastid | 19.33 | 49.81 |
| HORVU5Hr1G074600.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.65 | 31.34 |
| TraesCS5D01G044300.1 | Wheat | cytosol, vacuole | 56.54 | 30.3 |
| HORVU5Hr1G115270.2 | Barley | cytosol, nucleus | 33.87 | 28.77 |
| TraesCS6D01G318200.1 | Wheat | mitochondrion | 50.87 | 26.9 |
| HORVU6Hr1G018960.14 | Barley | cytosol | 49.85 | 26.38 |
| TraesCS5B01G037100.1 | Wheat | cytosol | 36.92 | 25.17 |
| HORVU3Hr1G116520.1 | Barley | golgi, peroxisome, plasma membrane | 4.8 | 17.28 |
| HORVU3Hr1G116440.3 | Barley | mitochondrion | 29.51 | 15.8 |
| HORVU5Hr1G115260.1 | Barley | cytosol | 5.09 | 8.84 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G018920.1 | EnsemblPlantsGene:HORVU6Hr1G018920 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF704 | PFAM:PF00931 |
| PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI00029688EE | UniProt:M0UEM9 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr6H:+:49541658..49544373
Molecular Weight (calculated)
78208.0 Da
IEP (calculated)
8.118
GRAVY (calculated)
-0.344
Length
688 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAAAVSLL STKAFNHLDN YGKSDGMEDV KNRLRLAMPK FQAVFNVANL ESIRQQSSAL DAWLWRLRDA VEEAEDSIDE LEYYQLDAKP KDPKVSGRSS
101: CFGKMKHRFV RSVIKRGNAL DNTRKKFTHR HRDTLKRLAK ALDGLAKAAE GVEDVFAAID HLRGTGLEGQ SVDDEDGKVF LSNATAFIGR ENEKKQIIGW
201: LTNTSDESSE TMSNVTGIPI VSVVGHGGMG KTALAQSICE EEEVLKCFNV IWVTVSTTFD ATSLTCKILE CVTGQKPSVD RLDPLQQYLK EKLKSMNYLL
301: VLDDVWEDKK LHEWERLFAP LRQLNTGSKI LLTTRMQSVS NMAASVMGVR RDQCLTLQGL EEDKNLELFN HHVFSGLNSQ AYMHFKLIGE QIAKKLGGCP
401: LVTKVTSGHL RGNMTTEYWH RFLDESLESF KSAEHDIISV LRLSYYDLPT ELQMCFRYCS LFPVDHEFRK EELVKMWIGS GLISQPTSYS HSLKLKVVDA
501: RQKFLEQLGD TANQFLAQLT RKSFFDRKSR ARRGVVTNEY YLMNGIMHEL ARTMSLGECA RITDPARFED EKDTVRHLCI AQLHNFSVEH INKIFCFKKL
601: RTIIIDSNCE AAEDIACALE KVLESSKSLR LIHSKLRNTL NFADKFVNLK HLRYLYLDRM SPDGMRDTSK LHHLTSFHSH SGLHTGIL
101: CFGKMKHRFV RSVIKRGNAL DNTRKKFTHR HRDTLKRLAK ALDGLAKAAE GVEDVFAAID HLRGTGLEGQ SVDDEDGKVF LSNATAFIGR ENEKKQIIGW
201: LTNTSDESSE TMSNVTGIPI VSVVGHGGMG KTALAQSICE EEEVLKCFNV IWVTVSTTFD ATSLTCKILE CVTGQKPSVD RLDPLQQYLK EKLKSMNYLL
301: VLDDVWEDKK LHEWERLFAP LRQLNTGSKI LLTTRMQSVS NMAASVMGVR RDQCLTLQGL EEDKNLELFN HHVFSGLNSQ AYMHFKLIGE QIAKKLGGCP
401: LVTKVTSGHL RGNMTTEYWH RFLDESLESF KSAEHDIISV LRLSYYDLPT ELQMCFRYCS LFPVDHEFRK EELVKMWIGS GLISQPTSYS HSLKLKVVDA
501: RQKFLEQLGD TANQFLAQLT RKSFFDRKSR ARRGVVTNEY YLMNGIMHEL ARTMSLGECA RITDPARFED EKDTVRHLCI AQLHNFSVEH INKIFCFKKL
601: RTIIIDSNCE AAEDIACALE KVLESSKSLR LIHSKLRNTL NFADKFVNLK HLRYLYLDRM SPDGMRDTSK LHHLTSFHSH SGLHTGIL
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.