Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 3
- golgi 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G053300.1 | Wheat | vacuole | 64.02 | 61.4 |
| TraesCS4A01G438800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 61.59 | 60.12 |
| TraesCS7A01G053200.1 | Wheat | vacuole | 49.39 | 39.51 |
| TraesCS7D01G048500.1 | Wheat | golgi | 48.78 | 38.65 |
| TraesCS4A01G438900.1 | Wheat | vacuole | 48.17 | 38.54 |
| TraesCS6B01G121300.1 | Wheat | extracellular, plasma membrane, vacuole | 29.27 | 30.97 |
| TraesCS6B01G121200.1 | Wheat | plasma membrane, plastid | 34.76 | 28.5 |
| TraesCS6D01G081400.1 | Wheat | extracellular | 21.34 | 27.56 |
| TraesCS6B01G121600.1 | Wheat | vacuole | 33.54 | 27.5 |
| TraesCS7A01G465400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.76 | 25.68 |
| TraesCS7B01G366100.1 | Wheat | vacuole | 33.54 | 24.77 |
| TraesCS6B01G121100.1 | Wheat | extracellular, plasma membrane, vacuole | 28.05 | 22.33 |
| TraesCS6A01G092600.1 | Wheat | mitochondrion | 31.71 | 18.57 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G009700.1 | EnsemblPlantsGene:HORVU7Hr1G009700 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000B47D20A | UniProt:A0A287VHE3 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr7H:-:13372098..13373702
Molecular Weight (calculated)
17790.9 Da
IEP (calculated)
4.196
GRAVY (calculated)
0.770
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMTQEEELA TKVTFYALAV AVLLAFVADR ACADGWGCAV ANVMSLIPGY LAILVPLLLP LAIMLFFFLR GAGSSSKAAD AEDVEERPSG DDEFSLCLQF
101: LLLLATLTGT ICFALYKYGY PELFDLVGRV ALFFIFVGEA LVYVRAALSL WRTNPKPSNM VAAE
101: LLLLATLTGT ICFALYKYGY PELFDLVGRV ALFFIFVGEA LVYVRAALSL WRTNPKPSNM VAAE
001: MSEEILKKYP ELAIEGGSTV TQRLDICNDA VTEMAVEASR ACIKNWGRSI SDITHVVYVS SSEARLPGGD LYLAKGLGLS PDTHRVLLYF VGCSGGVAGL
101: RVAKDIAENN PGSRVLLATS ETTIIGFKPP SVDRPYDLVG VALFGDGAGA MIIGSDPDPI CEKPLFELHT AIQNFLPETE KTIDGRLTEQ GINFKLSREL
201: PQIIEDNVEN FCKKLIGKAG LAHKNYNQMF WAVHPGGPAI LNRIEKRLNL SPEKLSPSRR ALMDYGNASS NSIVYVLEYM LEESKKVRNM NEEENEWGLI
301: LAFGPGVTFE GIIARNLDV
101: RVAKDIAENN PGSRVLLATS ETTIIGFKPP SVDRPYDLVG VALFGDGAGA MIIGSDPDPI CEKPLFELHT AIQNFLPETE KTIDGRLTEQ GINFKLSREL
201: PQIIEDNVEN FCKKLIGKAG LAHKNYNQMF WAVHPGGPAI LNRIEKRLNL SPEKLSPSRR ALMDYGNASS NSIVYVLEYM LEESKKVRNM NEEENEWGLI
301: LAFGPGVTFE GIIARNLDV
Arabidopsis Description
PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.