Factsheet for HORVU7Hr1G024150.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G108000.1	Wheat	nucleus	78.99	68.61
TraesCS7D01G108100.1	Wheat	nucleus	68.07	59.34
HORVU7Hr1G025580.1	Barley	cytosol, nucleus, plastid	68.07	54.36
HORVU7Hr1G038390.1	Barley	mitochondrion, nucleus, plastid	28.99	33.66
KXG21281	Sorghum	nucleus	24.37	33.53
Zm00001d006791_P001	Maize	nucleus	21.01	32.68
Zm00001d050594_P001	Maize	nucleus	26.89	30.33
HORVU7Hr1G028140.1	Barley	nucleus	26.05	28.7
EES18995	Sorghum	nucleus	30.25	26.09
EES18996	Sorghum	nucleus	31.09	25.69
HORVU1Hr1G080380.1	Barley	nucleus	34.87	24.63
Zm00001d010889_P001	Maize	plastid	24.79	24.48
Zm00001d024809_P001	Maize	nucleus	28.99	24.13
KXG21283	Sorghum	nucleus	24.37	23.77
OQU76057	Sorghum	nucleus	29.83	23.13
Zm00001d045162_P001	Maize	nucleus	28.15	23.1
OQU77390	Sorghum	nucleus	23.53	22.95
EER94504	Sorghum	nucleus	27.31	22.57
EER88198	Sorghum	nucleus	29.41	22.01
EER89299	Sorghum	nucleus	28.15	21.9
EER89573	Sorghum	nucleus	28.99	21.84
Zm00001d024814_P001	Maize	nucleus	25.63	21.71
EER88196	Sorghum	nucleus	28.57	21.52
EER89387	Sorghum	nucleus	27.73	20.75
KXG21280	Sorghum	nucleus	29.83	19.94
EES18997	Sorghum	nucleus	27.31	17.29
PGSC0003DMT400086891	Potato	nucleus	15.55	17.13
OQU77389	Sorghum	nucleus	23.95	17.07
Os06t0173800-00	Rice	vacuole	23.11	16.82
HORVU4Hr1G068410.1	Barley	nucleus	14.71	16.75
Zm00001d024810_P001	Maize	nucleus	26.89	16.41
Solyc02g082380.1.1	Tomato	nucleus	14.71	15.77
KXG21278	Sorghum	nucleus	22.69	15.7
Solyc02g082390.1.1	Tomato	nucleus	15.13	12.81
PGSC0003DMT400091980	Potato	nucleus	15.97	9.43

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	UniProt:A0A287VQD0	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G024150	EnsemblPlants:HORVU7Hr1G024150.1	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR44042	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI000B468E96	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:38125653..38127139

Molecular Weight (calculated)

27414.2 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.879

Length

238 amino acids

Sequence
(BLAST)

001: MNPRFNQERI PSEVEGGRTI IDGLNNYYYN DDTNHDKNKK NDIAAKLQTW FPRKTMPQVT NMYGDLAAEM HMLQCTEKEY HGTNGEHGVN YTVDGHVNKT
101: FGFQEEAAME GTDFLFGCPL DNRQTMDNQE EVSMVEQNKV VLENKTCIHQ PVLAPCAKGF WTPEEHRLFL HGLSVCGRGK WKDISKHFVT SRTPIQISSH
201: AQKYFMRLKN KGSRSQRYSI NDVELDDSGP WKMENTSN

Best Arabidopsis Sequence Match ( AT3G10580.2 )
(BLAST)

001: MDAAIPIWKR DDDKRFELAL VRFPAEGSPD FLENIAQFLQ KPLKEVYSYY QALVDDVTLI ESGKYPLPKY PEDDYVSLPE ATKSKTQGTG KKKGIPWSPE
101: EHRLFLDGLN KYGKGDWKSI SRECVTSRSP MQVASHAQKY FLRQKNKKGK RFSIHDMTLG DAENVTVPVS NLNSMGQQPH FDDQSPPDHY QDYFSQSNVT
201: IPGCNMHFMG QQPRFGDQIP PGEYHPYSRD NENFGFFDDD GEDDGSLASF QQLYKA

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SQY8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.