Factsheet for HORVU7Hr1G025580.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol, nucleus

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G121100.1	Wheat	nucleus	73.49	79.93
TraesCS7D01G118600.1	Wheat	nucleus	66.44	72.26
TraesCS7B01G019200.1	Wheat	nucleus	65.44	71.17
TraesCS7A01G120900.1	Wheat	nucleus	61.07	70.54
TraesCS7B01G019400.1	Wheat	nucleus	56.38	70.29
HORVU7Hr1G024150.1	Barley	nucleus	54.36	68.07
Zm00001d006791_P001	Maize	nucleus	19.13	37.25
KXG21281	Sorghum	nucleus	20.13	34.68
HORVU7Hr1G038390.1	Barley	mitochondrion, nucleus, plastid	23.49	34.15
Zm00001d050594_P001	Maize	nucleus	22.48	31.75
HORVU7Hr1G028140.1	Barley	nucleus	20.81	28.7
EES18996	Sorghum	nucleus	27.18	28.12
Zm00001d024814_P001	Maize	nucleus	25.84	27.4
Zm00001d010889_P001	Maize	plastid	22.15	27.39
EES18995	Sorghum	nucleus	24.83	26.81
HORVU1Hr1G080380.1	Barley	nucleus	29.87	26.41
Zm00001d024809_P001	Maize	nucleus	24.83	25.87
OQU76057	Sorghum	nucleus	26.51	25.73
EER94504	Sorghum	nucleus	24.16	25.0
EER89573	Sorghum	nucleus	26.51	25.0
KXG21283	Sorghum	nucleus	20.47	25.0
OQU77390	Sorghum	nucleus	20.13	24.59
EER88198	Sorghum	nucleus	26.17	24.53
EER89387	Sorghum	nucleus	25.84	24.21
Zm00001d045162_P001	Maize	nucleus	23.15	23.79
KXG21280	Sorghum	nucleus	28.19	23.6
EER89299	Sorghum	nucleus	24.16	23.53
EER88196	Sorghum	nucleus	24.5	23.1
Os06t0173800-00	Rice	vacuole	22.82	20.8
EES18997	Sorghum	nucleus	25.5	20.21
OQU77389	Sorghum	nucleus	22.15	19.76
Zm00001d024810_P001	Maize	nucleus	25.17	19.23
KXG21278	Sorghum	nucleus	20.47	17.73
PGSC0003DMT400086891	Potato	nucleus	12.42	17.13
Solyc02g082380.1.1	Tomato	nucleus	11.41	15.32
HORVU4Hr1G068410.1	Barley	nucleus	10.74	15.31
Solyc02g082390.1.1	Tomato	nucleus	12.42	13.17
PGSC0003DMT400091980	Potato	nucleus	12.75	9.43

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	UniProt:A0A287VRB2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G025580	EnsemblPlants:HORVU7Hr1G025580.1	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR44042	PANTHER:PTHR44042:SF3	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B4601E4	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:42514033..42515694

Molecular Weight (calculated)

34012.5 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.561

Length

298 amino acids

Sequence
(BLAST)

001: FGIIPPIVLP KSHKFSPKKP QISSMNQRVN QEWNPSEVEG ARSIIDFLNN YYNNDGTNHD KNKKHAIVAN LQGRFPRKTM QQVTSLYDDL VVEMNILKCP
101: EKEYDGTNSF HGVNYTVDGL MNKNFGLQEE VDMEGMGLLF GHPLETMPTM EIQEEVPIVE ENKVELENKM CIHQPVIAAH AKGYWTTEEH RLFLRGLHVC
201: GRGKWKDISK YFVTSRTPAQ ISSHAQKYFM KLQKEGSGIQ RYSINNVELD AADPWKMDNS FNFWQALALQ STIGASDQNP TLDVQTPLGP FVTMNNTF

Best Arabidopsis Sequence Match ( AT4G09450.1 )
(BLAST)

001: MAAFPQWTRV DDKRFELALL QIPEGSPNFI ENIAYYLQKP VKEVEYYYCA LVHDIERIES GKYVLPKYPE DDYVKLTEAG ESKGNGKKTG IPWSEEEQRL
101: FLEGLNKFGK GDWKNISRYC VKSRTSTQVA SHAQKYFARQ KQESTNTKRP SIHDMTLGVA VNVPGSNLES TGQQPHFGDQ IPSNQYYPSQ ENFRGFDQRW

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M0P7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.