Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G135000.1 | Wheat | nucleus | 80.56 | 40.56 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 48.61 | 35.96 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 54.17 | 34.72 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 62.96 | 33.92 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 65.74 | 33.18 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 65.74 | 32.64 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 63.89 | 32.09 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 62.96 | 31.7 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 62.96 | 31.7 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 62.96 | 31.63 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 62.96 | 31.63 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 62.04 | 31.24 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 62.04 | 31.16 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 48.15 | 29.21 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 26.39 | 27.8 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 28.7 | 26.05 |
| KXG21281 | Sorghum | nucleus | 18.98 | 23.7 |
| Zm00001d010889_P001 | Maize | plastid | 25.93 | 23.24 |
| Zm00001d050594_P001 | Maize | nucleus | 22.69 | 23.22 |
| Zm00001d006791_P001 | Maize | nucleus | 16.2 | 22.88 |
| KXG21283 | Sorghum | nucleus | 24.54 | 21.72 |
| Zm00001d024809_P001 | Maize | nucleus | 28.7 | 21.68 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 28.7 | 20.81 |
| OQU77390 | Sorghum | nucleus | 22.69 | 20.08 |
| Zm00001d045162_P001 | Maize | nucleus | 26.39 | 19.66 |
| EER89299 | Sorghum | nucleus | 27.78 | 19.61 |
| PGSC0003DMT400086891 | Potato | nucleus | 19.44 | 19.44 |
| EER89573 | Sorghum | nucleus | 28.24 | 19.3 |
| EER88196 | Sorghum | nucleus | 28.24 | 19.3 |
| OQU76057 | Sorghum | nucleus | 27.31 | 19.22 |
| EES18995 | Sorghum | nucleus | 24.54 | 19.2 |
| EES18996 | Sorghum | nucleus | 25.0 | 18.75 |
| EER94504 | Sorghum | nucleus | 24.07 | 18.06 |
| Zm00001d024814_P001 | Maize | nucleus | 23.15 | 17.79 |
| EER89387 | Sorghum | nucleus | 25.46 | 17.3 |
| KXG21280 | Sorghum | nucleus | 28.24 | 17.13 |
| Solyc02g082380.1.1 | Tomato | nucleus | 17.59 | 17.12 |
| EER88198 | Sorghum | nucleus | 24.54 | 16.67 |
| OQU77389 | Sorghum | nucleus | 25.46 | 16.47 |
| Zm00001d024810_P001 | Maize | nucleus | 27.78 | 15.38 |
| KXG21278 | Sorghum | nucleus | 23.61 | 14.83 |
| Os06t0173800-00 | Rice | vacuole | 22.22 | 14.68 |
| Solyc02g082390.1.1 | Tomato | nucleus | 18.52 | 14.23 |
| EES18997 | Sorghum | nucleus | 24.54 | 14.1 |
| HORVU4Hr1G068410.1 | Barley | nucleus | 12.96 | 13.4 |
| PGSC0003DMT400091980 | Potato | nucleus | 17.59 | 9.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | UniProt:A0A287VV93 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU7Hr1G028140 | EnsemblPlants:HORVU7Hr1G028140.1 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR44042 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI000B4770A9 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:50504424..50506669
Molecular Weight (calculated)
24294.7 Da
IEP (calculated)
9.265
GRAVY (calculated)
-0.644
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDNGFSFPY ALEDTRIAKM EEAQMMVDKN KMVVLENNTC NDRPVVAPHQ RKYWTEEEHK SFLYGLKVYG RGDWKNISKH FVSTKTPIQV SSHAQKFFKR
101: IQKKASSGTK RYSINDVRLD DNDLLAANNS SAPRQALSFT GLNNNPSFKL QAPTSSFTVM NNLAQCSPSI YNQQVGQQPM WSDRKMMGSV GAVMDGVAND
201: VPDGQQGSAY FYLGNV
101: IQKKASSGTK RYSINDVRLD DNDLLAANNS SAPRQALSFT GLNNNPSFKL QAPTSSFTVM NNLAQCSPSI YNQQVGQQPM WSDRKMMGSV GAVMDGVAND
201: VPDGQQGSAY FYLGNV
001: MNRGIEVMSP ATYLETSNWL FQENRGTKWT AEENKKFENA LAFYDKDTPD RWSRVAAMLP GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YASDSFTLDW
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GXN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.