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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, endoplasmic reticulum

Predictor Summary:
  • plasma membrane 1
  • extracellular 1
  • endoplasmic reticulum 2
  • golgi 1
  • vacuole 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plastid
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
TargetP:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P00830_001 Banana endoplasmic reticulum, plasma membrane 50.56 45.92
Os06t0643500-01 Rice extracellular 65.73 45.88
GSMUA_Achr1P26060_001 Banana plastid 54.49 43.69
HORVU7Hr1G115830.3 Barley extracellular 71.91 41.83
EER88705 Sorghum extracellular 60.11 34.63
Zm00001d046596_P001 Maize extracellular 57.3 33.55
HORVU7Hr1G115810.1 Barley plastid 60.67 28.65
HORVU2Hr1G099450.1 Barley endoplasmic reticulum 30.9 28.65
HORVU7Hr1G027440.2 Barley extracellular 39.89 25.09
HORVU2Hr1G099370.2 Barley mitochondrion 36.52 24.07
HORVU2Hr1G114680.2 Barley endoplasmic reticulum 37.64 15.99
HORVU2Hr1G099470.5 Barley extracellular 35.96 13.5
Protein Annotations
EnsemblPlants:HORVU7Hr1G115850.2EnsemblPlantsGene:HORVU7Hr1G115850Gene3D:1.10.110.10InterPro:Bifun_inhib/LTP/seed_sfInterPro:Bifunc_inhib/LTP/seed_storeInterPro:Hydrophob_seed
PANTHER:PTHR31731PANTHER:PTHR31731:SF1PFAM:PF14547SEG:segSignalP:SignalP-noTMSMART:SM00499
SUPFAM:SSF47699UniParc:UPI000B47B06EUniProt:A0A287XX00MapMan:35.2::
Description
No Description!
Coordinates
chrchr7H:-:642388692..642389403
Molecular Weight (calculated)
17634.0 Da
IEP (calculated)
7.639
GRAVY (calculated)
0.521
Length
178 amino acids
Sequence
(BLAST)
001: SFIIHAIIVL IGNTILVWIH RQNTVPSKPL VDXXXXXXXX XVTAPPVTYP APPVTAPPVT YPSPPVTNPP VTYPSPPVNT PCPPPPPATP AAQTCPVDSL
101: KIGACVDLLG GLVHVGLGDP VVNKCCPLLQ GLVELEAAVC LCTTIRLKLL NINLVLPLAL QLLLTCGKTP PPSYTCSI
Best Arabidopsis Sequence Match ( AT2G10940.2 )
(BLAST)
001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
Arabidopsis Description
At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.