Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73100.1 | KRH10601 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | KRH21766 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | KRH42098 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | KRH49811 | AT5G09540.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66648 | Soybean | nucleus | 93.65 | 64.55 |
| VIT_08s0040g00360.t01 | Wine grape | nucleus | 61.27 | 40.57 |
| Solyc09g082050.2.1 | Tomato | nucleus | 49.18 | 37.09 |
| PGSC0003DMT400077329 | Potato | nucleus | 50.61 | 36.81 |
| Solyc10g077070.1.1 | Tomato | nucleus | 53.07 | 36.27 |
| PGSC0003DMT400018512 | Potato | nucleus | 52.87 | 35.93 |
| Bra005829.1-P | Field mustard | nucleus | 44.06 | 33.33 |
| Bra009409.1-P | Field mustard | nucleus | 44.06 | 32.33 |
| AT5G04940.2 | Thale cress | nucleus | 44.26 | 32.24 |
| Bra028776.1-P | Field mustard | nucleus | 41.6 | 31.97 |
| Bra009408.1-P | Field mustard | nucleus | 32.99 | 31.45 |
| AT1G73100.1 | Thale cress | nucleus | 42.62 | 31.09 |
| KRH13229 | Soybean | nucleus | 42.62 | 30.91 |
| Bra016018.1-P | Field mustard | nucleus | 42.42 | 30.58 |
| KRH20576 | Soybean | nucleus | 42.01 | 30.46 |
| KRH62706 | Soybean | nucleus | 41.6 | 30.43 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 38.32 | 30.26 |
| Os05t0490700-01 | Rice | extracellular | 38.73 | 28.12 |
| EES19725 | Sorghum | nucleus | 37.91 | 27.45 |
| Zm00001d010646_P001 | Maize | plastid | 36.48 | 27.3 |
| Zm00001d038541_P002 | Maize | nucleus | 38.32 | 27.02 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 37.3 | 27.0 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 37.3 | 26.92 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 37.3 | 26.92 |
| TraesCS3D01G378200.1 | Wheat | plastid | 37.7 | 26.86 |
| Os11t0131600-00 | Rice | nucleus | 36.48 | 26.81 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 36.27 | 26.26 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 36.27 | 26.26 |
| Os12t0128450-00 | Rice | nucleus | 32.58 | 25.9 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 35.66 | 25.82 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 37.5 | 24.86 |
| EES01635 | Sorghum | nucleus | 37.7 | 24.8 |
| Zm00001d041005_P001 | Maize | nucleus | 35.25 | 24.61 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 34.43 | 24.42 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 34.02 | 24.34 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 35.86 | 24.14 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 34.43 | 23.66 |
| Zm00001d043135_P003 | Maize | nucleus | 37.5 | 23.49 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 35.66 | 23.42 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 35.66 | 23.42 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 35.66 | 23.36 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 38.93 | 23.2 |
| EES10399 | Sorghum | nucleus | 38.52 | 22.95 |
| OQU78645 | Sorghum | nucleus | 35.04 | 22.92 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 39.14 | 22.9 |
| Os11t0602200-01 | Rice | nucleus | 38.11 | 22.88 |
| EER96081 | Sorghum | nucleus | 38.73 | 22.77 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 34.63 | 22.75 |
| Zm00001d019195_P001 | Maize | nucleus | 39.34 | 22.43 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 37.3 | 21.85 |
| KRH07636 | Soybean | nucleus | 25.61 | 21.74 |
| TraesCS3A01G385200.1 | Wheat | plastid | 31.35 | 21.07 |
| KRH77260 | Soybean | nucleus | 20.7 | 20.74 |
| KRH28232 | Soybean | nucleus | 20.7 | 20.65 |
| KRH49479 | Soybean | nucleus | 28.69 | 19.75 |
| KRG89164 | Soybean | nucleus | 28.48 | 19.41 |
| KRH56252 | Soybean | nucleus | 8.2 | 18.78 |
| KRG90121 | Soybean | nucleus | 18.65 | 16.49 |
| KRH06819 | Soybean | nucleus | 23.36 | 15.83 |
| KRH20251 | Soybean | nucleus, plastid | 20.49 | 15.11 |
| KRH77297 | Soybean | nucleus | 27.66 | 12.49 |
| KRH28192 | Soybean | nucleus | 28.28 | 12.48 |
| KRG91550 | Soybean | nucleus | 5.74 | 8.12 |
| KRG97025 | Soybean | nucleus | 4.3 | 7.39 |
| KRH67447 | Soybean | nucleus | 9.22 | 6.21 |
| KRH76344 | Soybean | nucleus | 4.1 | 6.04 |
| KRG95723 | Soybean | nucleus | 8.81 | 5.94 |
| KRH39353 | Soybean | nucleus | 4.71 | 5.72 |
| KRH32246 | Soybean | nucleus | 9.43 | 5.6 |
| KRH19618 | Soybean | nucleus | 9.22 | 5.47 |
| KRH34133 | Soybean | nucleus | 7.58 | 5.39 |
| KRG92731 | Soybean | nucleus | 7.79 | 5.33 |
| KRH68776 | Soybean | nucleus | 7.17 | 5.17 |
| KRH76897 | Soybean | nucleus | 14.55 | 4.76 |
| KRH28566 | Soybean | nucleus | 13.93 | 4.71 |
| KRH69981 | Soybean | nucleus | 14.34 | 4.69 |
| KRH08338 | Soybean | nucleus | 14.34 | 4.68 |
| KRH35283 | Soybean | nucleus | 1.02 | 3.5 |
| KRG94709 | Soybean | nucleus | 2.05 | 3.32 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 0.0 | 0.0 |
| KRH67444 | Soybean | cytosol | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | MapMan:35.1 | UniProt:A0A0R0EXP9 | EMBL:ACUP02012070 | EnsemblPlantsGene:GLYMA_19G1241001 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR003105 | InterPro:IPR036987 |
| EnsemblPlants:KRG95012 | ProteinID:KRG95012 | ProteinID:KRG95012.1 | PFAM:PF02182 | PFscan:PS51015 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF479 | InterPro:PUA-like_sf | SMART:SM00466 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 |
| SUPFAM:SSF88697 | UniParc:UPI0006EE08F2 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:38209584..38212107
Molecular Weight (calculated)
52467.8 Da
IEP (calculated)
8.174
GRAVY (calculated)
-0.437
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHHFGQGTT PASESFDKTR VLNVKPLRTL VPVFPSPSNP ASSSTPQGGA PFVCVSPSGP FPSGVAPFYP FFISSESQRL SEQNAQTPSG QRVPAAPVST
101: AVPINSFRTP TGAANGDVGS SQKNTRSRGW VTEEDGYSNV EIEEIDADEG TGTGRSKRKS NKKTKARQSG GSVSVDVDPD AVAADILKSL NALVFDVLSQ
201: PEGSRDSVAY TLMIYEVMRR KLGQIEDSNR AANSGAKRPD LKAGAIMMNK GIRTNSKKRI GVVPGVEIGD IFFFRFELCL VGLHAPSMAG IDYIGKTSQE
301: EEPLAVSIVS SGGYEDNVED GDVLIYSGQG GVNRDKGASD QKLERGNLAL EKSAHRGNEV RVIRGLRDPQ HPTGKIYVYD GLYKIQNSWV EKAKSGFNVF
401: KYNLVRLPGQ PQAYMIWKSI QQWTEKSASR AGVILPDLTS GAENIPVCLV NDVDNEKGPA YFTYIPTLKN LRPTAPVESS TGCPCGGG
101: AVPINSFRTP TGAANGDVGS SQKNTRSRGW VTEEDGYSNV EIEEIDADEG TGTGRSKRKS NKKTKARQSG GSVSVDVDPD AVAADILKSL NALVFDVLSQ
201: PEGSRDSVAY TLMIYEVMRR KLGQIEDSNR AANSGAKRPD LKAGAIMMNK GIRTNSKKRI GVVPGVEIGD IFFFRFELCL VGLHAPSMAG IDYIGKTSQE
301: EEPLAVSIVS SGGYEDNVED GDVLIYSGQG GVNRDKGASD QKLERGNLAL EKSAHRGNEV RVIRGLRDPQ HPTGKIYVYD GLYKIQNSWV EKAKSGFNVF
401: KYNLVRLPGQ PQAYMIWKSI QQWTEKSASR AGVILPDLTS GAENIPVCLV NDVDNEKGPA YFTYIPTLKN LRPTAPVESS TGCPCGGG
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.