Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67076 | Soybean | cytosol | 61.93 | 72.01 |
| VIT_08s0007g05730.t01 | Wine grape | cytosol | 10.28 | 36.72 |
| VIT_06s0004g01230.t01 | Wine grape | cytosol | 19.47 | 27.9 |
Protein Annotations
| EntrezGene:102661734 | MapMan:35.2 | EMBL:ACUP02012105 | InterPro:DC1 | EnsemblPlantsGene:GLYMA_19G148600 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0098869 | UniProt:K7MYG5 | EnsemblPlants:KRG95397 | ProteinID:KRG95397 |
| ProteinID:KRG95397.1 | PFAM:PF03107 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF53 | SUPFAM:SSF57889 | UniParc:UPI0002960266 |
Description
hypothetical protein
Coordinates
chr19:+:40896512..40899595
Molecular Weight (calculated)
51786.3 Da
IEP (calculated)
7.716
GRAVY (calculated)
-0.489
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLHKDPNV FHFSHPHPLD CTTPPSTENN NIVSCFGCKL KVKHGEDYYQ CKTCAFSLHH VCYKMPLITN HPSHPSHDLV LLAIPLSSSS PYTKATLNCV
101: ACGNHVTGFC YHCAECSIFF HSLCLALPLS LEITFHPHKI KLEFSPPYDF FCDLCNKPSY NNGWLYRCNM CEFDTHIVCA FENLEPHLFQ NPSFPQSSPL
201: LRQLTSYQVE HKRVSASVGD SCKGYEYEIM SLVAQQIGGG IRENSDGAVV GWDKRLYSSP RKKHNKTGSG KMKIISELEL QEKELSPAEL LLKLEERTPL
301: RDKLTPLSDH SETPFSNQYS DSYFSIDLAK SYSTHHGRRS QVPREVGSDQ IIRAVTMPER VIVSNSGQRE EPFGLVYWPF NDSYHVGQQN KVNNAAFYIK
401: EGPTTDFGKS TSSQRIVKKN PNQNIAKRSV DQDQTIAKSE SERYSCSCWR KFLTCCL
101: ACGNHVTGFC YHCAECSIFF HSLCLALPLS LEITFHPHKI KLEFSPPYDF FCDLCNKPSY NNGWLYRCNM CEFDTHIVCA FENLEPHLFQ NPSFPQSSPL
201: LRQLTSYQVE HKRVSASVGD SCKGYEYEIM SLVAQQIGGG IRENSDGAVV GWDKRLYSSP RKKHNKTGSG KMKIISELEL QEKELSPAEL LLKLEERTPL
301: RDKLTPLSDH SETPFSNQYS DSYFSIDLAK SYSTHHGRRS QVPREVGSDQ IIRAVTMPER VIVSNSGQRE EPFGLVYWPF NDSYHVGQQN KVNNAAFYIK
401: EGPTTDFGKS TSSQRIVKKN PNQNIAKRSV DQDQTIAKSE SERYSCSCWR KFLTCCL
001: MGKPTTQNNS FINHFSHPHR LQLTPATSSP PCSACKLTGG NGRVYSCRPC NFSLHESCSK MKQVITHPSH PSHTLSLLVA PVYDGGYFNC DGCGIHGTGF
101: SYQCSVCDFD IHALCAYKPL SIIHKSHPQH NLKLAFQSPY GANKGFSCDI CRKIGKNQWL YRCIPCEFDA HVGCITGPNP HLLQHSTSAP NPHTHHAGHP
201: QHQNSLPVPN QGSNRVRPMP MTRPNRTINP NRPIAQNAAV NGPRRQNNNL GYNAQVGPNG PNELTGQGSM DGSGYNGSAS ATNKEFDVDV DVDVDVDVDV
301: DVDVEVEYEG DVYVEEANDE GEDVDGNDEG EDVDGNGLEI VACVDNLSVA YSESDFGSSS DARSQCNDLS DADLYPLSLD NTQGPRPVRM NQGSGGGRKK
401: NTNQNGQASR SKKIVGNGPR GGLQGSNSPI QSPRGPQTRR VQNVRNNPTR GRGGAVSVRV NRPRDPSAFI APQGFNGPSG GPSNAIDSGA NNDNYNEVEG
501: TDVYVGEDNV GYEESYGGGD GDCDFEVGGD FGDEGYDQSY DDNYGENDFE SYSDITGGSE SMYEDGESYG TMNDSQYSGF NEEPNNQYAP MVGPVGGPGM
601: NNQNQYGQNG RPRNVGMYGR GGTNMNRYGN VNQGANRMQP RTMGGRPLQY RPNGRPNMAN GGVPNGPLGL GTPMLMNTMV QGLCQSFGMN MLIGGGGDAN
701: GGAGDGGGGG FFGGETEF
101: SYQCSVCDFD IHALCAYKPL SIIHKSHPQH NLKLAFQSPY GANKGFSCDI CRKIGKNQWL YRCIPCEFDA HVGCITGPNP HLLQHSTSAP NPHTHHAGHP
201: QHQNSLPVPN QGSNRVRPMP MTRPNRTINP NRPIAQNAAV NGPRRQNNNL GYNAQVGPNG PNELTGQGSM DGSGYNGSAS ATNKEFDVDV DVDVDVDVDV
301: DVDVEVEYEG DVYVEEANDE GEDVDGNDEG EDVDGNGLEI VACVDNLSVA YSESDFGSSS DARSQCNDLS DADLYPLSLD NTQGPRPVRM NQGSGGGRKK
401: NTNQNGQASR SKKIVGNGPR GGLQGSNSPI QSPRGPQTRR VQNVRNNPTR GRGGAVSVRV NRPRDPSAFI APQGFNGPSG GPSNAIDSGA NNDNYNEVEG
501: TDVYVGEDNV GYEESYGGGD GDCDFEVGGD FGDEGYDQSY DDNYGENDFE SYSDITGGSE SMYEDGESYG TMNDSQYSGF NEEPNNQYAP MVGPVGGPGM
601: NNQNQYGQNG RPRNVGMYGR GGTNMNRYGN VNQGANRMQP RTMGGRPLQY RPNGRPNMAN GGVPNGPLGL GTPMLMNTMV QGLCQSFGMN MLIGGGGDAN
701: GGAGDGGGGG FFGGETEF
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUW8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.