Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45560 | Soybean | nucleus | 70.0 | 68.68 |
| KRH62217 | Soybean | cytosol, nucleus | 32.31 | 34.15 |
| KRH69663 | Soybean | nucleus | 38.46 | 33.67 |
| KRH72458 | Soybean | nucleus | 32.69 | 24.43 |
| KRH16845 | Soybean | nucleus | 31.92 | 22.8 |
| PGSC0003DMT400092251 | Potato | cytosol | 31.15 | 22.44 |
| Solyc11g010540.1.1 | Tomato | cytosol | 30.77 | 21.39 |
| KRH74501 | Soybean | nucleus | 37.69 | 20.21 |
| KRG89389 | Soybean | extracellular | 11.54 | 20.0 |
| KRH42098 | Soybean | nucleus | 31.92 | 18.24 |
| KRH49811 | Soybean | nucleus | 31.15 | 17.2 |
| KRH10601 | Soybean | nucleus | 30.0 | 15.69 |
| PGSC0003DMT400041631 | Potato | cytosol, mitochondrion, nucleus, plastid | 19.23 | 14.66 |
| KRH21766 | Soybean | nucleus | 28.08 | 14.63 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:102659715 | MapMan:12.5.1.16.2 | EMBL:ACUP02011067 | InterPro:DnaJ_domain | EnsemblPlantsGene:GLYMA_18G146200 |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | UniProt:K7MSF9 | EnsemblPlants:KRG99455 | ProteinID:KRG99455 |
| ProteinID:KRG99455.1 | PFAM:PF00226 | PFscan:PS50076 | PANTHER:PTHR45496 | SUPFAM:SSF46565 | SUPFAM:SSF57903 |
| UniParc:UPI00023DA37F | InterPro:Znf_FYVE_PHD | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:24753304..24754749
Molecular Weight (calculated)
29648.1 Da
IEP (calculated)
8.549
GRAVY (calculated)
-0.680
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQDTDNNGT LGGSEDSLLR SCLSLLTRRS FTACRESANQ ISRSDPTVSL HLDQILAVAD VLTAAESRRG PSHPHDWYSV LRLHPGGADN RDLARQHFKT
101: LVRLLDPNKN KLPFADEALM RVREAWCVIS DPTRKARFDK EIEESARTAS FWTMCPYCWY LHEYERKYED CTLRCSNCQR TFHGAAVPPP PLEAVVAGKE
201: EYYCYHMSLP VRYPVGERCR FGGEGNGARK RMRVKTVANR MKMKRFVDAN NGESDNDGVR
101: LVRLLDPNKN KLPFADEALM RVREAWCVIS DPTRKARFDK EIEESARTAS FWTMCPYCWY LHEYERKYED CTLRCSNCQR TFHGAAVPPP PLEAVVAGKE
201: EYYCYHMSLP VRYPVGERCR FGGEGNGARK RMRVKTVANR MKMKRFVDAN NGESDNDGVR
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.