Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 7
- extracellular 6
- endoplasmic reticulum 6
- golgi 5
- vacuole 6
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20158 | Soybean | endoplasmic reticulum | 89.47 | 74.89 |
| PGSC0003DMT400007468 | Potato | extracellular | 66.84 | 52.7 |
| VIT_11s0016g05840.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 68.95 | 49.25 |
| Solyc12g009650.1.1 | Tomato | nucleus | 65.26 | 46.79 |
| KRH04104 | Soybean | extracellular, plasma membrane | 43.16 | 46.07 |
| KRH57376 | Soybean | plasma membrane | 41.05 | 43.58 |
| Bra037196.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 53.68 | 40.16 |
| CDX81428 | Canola | endoplasmic reticulum, plasma membrane | 53.68 | 39.84 |
| Zm00001d002094_P001 | Maize | extracellular, plastid | 41.05 | 38.42 |
| Zm00001d026436_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 38.42 | 35.78 |
| CDY18576 | Canola | endoplasmic reticulum, plasma membrane | 52.63 | 35.71 |
| AT2G10940.2 | Thale cress | endoplasmic reticulum, plasma membrane | 53.68 | 35.05 |
| EES12957 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 38.95 | 34.1 |
| Os04t0644400-01 | Rice | nucleus | 32.63 | 34.07 |
| TraesCS2B01G546700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 45.26 | 30.71 |
| TraesCS2D01G519700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.68 | 28.72 |
| TraesCS2A01G518100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.68 | 28.42 |
| KRG90032 | Soybean | extracellular | 47.37 | 27.44 |
| KRH17654 | Soybean | extracellular | 50.53 | 25.0 |
| HORVU2Hr1G114680.2 | Barley | endoplasmic reticulum | 45.26 | 20.53 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:547928 | EMBL:ACUP02010355 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store |
| EnsemblPlantsGene:GLYMA_17G111100 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Hydrophob_seed | UniProt:I1MU53 |
| EnsemblPlants:KRH03647 | ProteinID:KRH03647 | ProteinID:KRH03647.1 | PFAM:PF14547 | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF54 |
| SMART:SM00499 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000E64988 | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:8715603..8717614
Molecular Weight (calculated)
19747.1 Da
IEP (calculated)
8.937
GRAVY (calculated)
0.354
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSKIYAYL FLCMIFLSSA TPILGCGYCG KPPKKHKPGK TPKTPKTPVV KPPVTIPPIN VPPVVLPPIV KPPGILPPIP IINPPTTPGK GGNTPCPPPK
101: SPAQATCPID TLKLGACVDL LGGLVHIGLG DPVANQCCPV LQGLVEVEAA VCLCTTLKLK LLNLNIYVPL ALQLLVTCGK SPPPGYTCSL
101: SPAQATCPID TLKLGACVDL LGGLVHIGLG DPVANQCCPV LQGLVEVEAA VCLCTTLKLK LLNLNIYVPL ALQLLVTCGK SPPPGYTCSL
001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
Arabidopsis Description
At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.