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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:nucleus
PProwler:plastid
WoLF PSORT:plastid
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH49479 Soybean nucleus 57.22 46.4
KRG89164 Soybean nucleus 57.74 46.37
VIT_05s0049g02220.t01 Wine grape nucleus 53.39 45.68
Bra007048.1-P Field mustard nucleus 50.09 45.64
CDX78210 Canola nucleus 50.09 45.64
CDX73506 Canola nucleus 50.09 45.5
GSMUA_Achr4P29270_001 Banana nucleus 41.91 44.8
PGSC0003DMT400075191 Potato nucleus 50.61 44.09
PGSC0003DMT400003956 Potato nucleus 53.04 43.82
Solyc12g096990.1.1 Tomato nucleus 50.43 43.61
AT4G13460.2 Thale cress nucleus 49.22 43.54
Solyc09g090810.1.1 Tomato nucleus 52.7 43.53
Bra021840.1-P Field mustard nucleus, plastid 45.91 41.44
CDY23755 Canola nucleus 45.74 41.29
CDY37735 Canola nucleus, plastid 45.57 41.13
GSMUA_Achr1P01130_001 Banana nucleus 39.3 41.09
AT2G33290.2 Thale cress nucleus 45.57 40.25
GSMUA_Achr5P13120_001 Banana nucleus 41.39 39.21
CDY19475 Canola nucleus 35.83 37.32
TraesCS2A01G235400.1 Wheat nucleus 43.3 37.16
TraesCS2D01G240000.1 Wheat nucleus 43.3 36.89
HORVU2Hr1G053260.1 Barley nucleus 43.13 36.8
TraesCS2B01G254700.1 Wheat nucleus 42.78 36.55
Os07t0435900-01 Rice nucleus 42.96 36.11
CDY17156 Canola nucleus 35.3 35.87
EER96294 Sorghum nucleus 41.74 33.8
Bra005511.1-P Field mustard plastid 35.48 33.28
GSMUA_Achr6P36730_001 Banana nucleus 32.35 31.53
Zm00001d005445_P001 Maize nucleus 29.91 30.12
KRH62706 Soybean nucleus 30.43 26.24
Zm00001d019520_P001 Maize nucleus 29.39 25.72
KRG95012 Soybean plastid 21.74 25.61
KRH20576 Soybean nucleus 29.57 25.26
KRH13229 Soybean nucleus 29.04 24.81
KRH66648 Soybean nucleus 30.43 24.72
KRG90121 Soybean nucleus 22.26 23.19
KRH20251 Soybean nucleus, plastid 24.0 20.85
KRH06819 Soybean nucleus 24.87 19.86
KRH28232 Soybean nucleus 16.52 19.43
KRH77260 Soybean nucleus 16.17 19.1
KRG94709 Soybean nucleus 8.7 16.61
KRH77297 Soybean nucleus 29.22 15.54
KRH76344 Soybean nucleus 8.87 15.41
KRH28192 Soybean nucleus 28.87 15.01
KRG91550 Soybean nucleus 8.87 14.78
KRG97025 Soybean nucleus 7.13 14.44
KRH56252 Soybean nucleus 4.87 13.15
KRH39353 Soybean nucleus 9.04 12.94
KRG95723 Soybean nucleus 13.39 10.64
KRH67447 Soybean nucleus 13.39 10.62
KRH34133 Soybean nucleus 12.17 10.2
KRH68776 Soybean nucleus 11.13 9.45
KRH19618 Soybean nucleus 13.39 9.37
KRG92731 Soybean nucleus 11.48 9.26
KRH32246 Soybean nucleus 13.04 9.14
KRH28566 Soybean nucleus 13.74 5.47
KRH76897 Soybean nucleus 13.74 5.29
KRH08338 Soybean nucleus 13.57 5.21
KRH69981 Soybean nucleus 13.39 5.15
KRH35283 Soybean nucleus 1.04 4.2
KRH67444 Soybean cytosol 0.0 0.0
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.7MapMan:12.5.1.1Gene3D:2.170.270.10Gene3D:2.30.280.10UniProt:A0A0R0G0G9
EMBL:ACUP02010068EnsemblPlantsGene:GLYMA_16G1002002GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0006464GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0009987GO:GO:0016043GO:GO:0016571GO:GO:0016740
GO:GO:0018024GO:GO:0019538GO:GO:0034968InterPro:IPR003105InterPro:IPR007728InterPro:IPR036987
EnsemblPlants:KRH07636ProteinID:KRH07636ProteinID:KRH07636.1PFAM:PF02182PFAM:PF05033PFscan:PS50867
PFscan:PS51015PANTHER:PTHR22884PANTHER:PTHR22884:SF95InterPro:PUA-like_sfInterPro:Pre-SET_domSMART:SM00466
SMART:SM00468InterPro:SRA-YDG_sfInterPro:SRA_YDGSUPFAM:SSF82199SUPFAM:SSF88697UniParc:UPI0006EDDA9C
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr16:+:19806124..19808162
Molecular Weight (calculated)
63294.6 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.242
Length
575 amino acids
Sequence
(BLAST)
001: MMDSVLPDTS TNAIASSTPT SHPHSQPSLP QTLLVPKPEP FWDTHIETSD ELDLYSEFNR VTELFHFAFG ATNVVDPFGA TNVACPEQTP LVPVPQELDS
101: AAQPDPNSPS EDVLRAIVPV PPEQQDGAVA TATVPRRKQS RQKELVRVMD LSPRDEAHLR ETVRRTRLIY DSLRVLTSVE EEKRVASVAA AAVAAAAAVT
201: TLEGCLPVDG STGKLRRLRG DLRAASLMRE RGLWLNRDKR IVGAIPGIMV GDLFLFRMEL CVVGLHGQIQ AGIDFLPASM SSTGEPIATS VIVSGGYEDD
301: MDDGEVIVYT GHGGQEKNSS RQISHQKLES GNLALERSMH YGVEVRVIRG MKYEGSAAGS GKVYVYDGVY RIVDCWFDVG RSGFGVYKFK LWRIEGQAKM
401: GSAILKEARN VRRSELDLNP TSADMANRKE NVAVRLFNDF DDDRGPLCYE YLVRTCFPKF VFHQSGKATG CDCVDGCGDG CFCAMKNGGE FPYTLQGHLV
501: RGKPLIFECG PFCSCPPHCR NRVAQKGLKY RLEVFRSKQT SWGVRSLDLI QAGSFICEFA GVVLTREQAQ LLTMN
Best Arabidopsis Sequence Match ( AT4G13460.1 )
(BLAST)
001: MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP
101: EPEPNPYSTS DSSPSVATQR PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIYDSLRM FLMMEEAKRN GVGGRRARAD GKAGKAGSMM RDCMLWMNRD
201: KRIVGSIPGV QVGDIFFFRF ELCVMGLHGH PQSGIDFLTG SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGQGGQDRL GRQAEHQRLE GGNLAMERSM
301: YYGIEVRVIR GLKYENEVSS RVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG SSVLKFARTL KTNPLSVRPR GYINFDISNG KENVPVYLFN
401: DIDSDQEPLY YEYLAQTSFP PGLFVQQSGN ASGCDCVNGC GSGCLCEAKN SGEIAYDYNG TLIRQKPLIH ECGSACQCPP SCRNRVTQKG LRNRLEVFRS
501: LETGWGVRSL DVLHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS ARWEDWGDLS QVLADFERPS YPDIPPVDFA MDVSKMRNVA CYISHSTDPN
601: VIVQFVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVVD DWNAKLAICN
Arabidopsis Description
SUVH9Histone-lysine N-methyltransferase family member SUVH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.