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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH69981 Soybean nucleus 92.71 92.84
KRH28566 Soybean nucleus 71.93 74.46
KRH76897 Soybean nucleus 73.13 73.32
VIT_04s0023g00980.t01 Wine grape nucleus 62.37 61.5
Solyc02g089970.2.1 Tomato nucleus 55.28 54.8
Bra032148.1-P Field mustard nucleus 46.66 51.1
CDY39668 Canola nucleus 46.66 51.1
CDY62521 Canola nucleus 46.32 50.73
AT2G23740.2 Thale cress nucleus 46.52 50.36
CDY46064 Canola nucleus 15.44 46.95
Os02t0708600-01 Rice nucleus 17.05 45.29
Bra039210.1-P Field mustard plastid 9.02 44.12
GSMUA_Achr5P08820_001 Banana cytosol 6.95 43.88
GSMUA_Achr5P08830_001 Banana nucleus 32.69 43.05
Zm00001d044165_P001 Maize nucleus 7.42 36.51
HORVU6Hr1G069350.6 Barley nucleus 39.17 36.15
KXG30908 Sorghum nucleus 38.37 36.06
TraesCS6D01G254900.2 Wheat nucleus 38.84 35.98
TraesCS6B01G302100.2 Wheat nucleus 38.9 35.88
TraesCS6A01G274600.1 Wheat nucleus 39.1 35.85
Zm00001d017798_P002 Maize nucleus 34.56 34.63
Zm00001d051590_P001 Maize nucleus 34.22 34.0
Os02t0708500-01 Rice cytosol 7.89 27.06
KRH76344 Soybean nucleus 5.68 25.68
KRG94709 Soybean nucleus 5.15 25.58
KRG91550 Soybean nucleus 5.41 23.48
KRH39353 Soybean nucleus 5.95 22.14
KRG90121 Soybean nucleus 8.09 21.92
KRH56252 Soybean nucleus 3.01 21.13
KRH66648 Soybean nucleus 9.63 20.34
KRH62706 Soybean nucleus 8.76 19.64
KRH35283 Soybean nucleus 1.87 19.58
KRH13229 Soybean nucleus 8.69 19.32
KRH34133 Soybean nucleus 8.82 19.24
KRH20576 Soybean nucleus 8.56 19.02
KRH20251 Soybean nucleus, plastid 8.29 18.73
KRG92731 Soybean nucleus 8.82 18.51
KRH68776 Soybean nucleus 8.22 18.17
KRG95723 Soybean nucleus 8.42 17.4
KRH06819 Soybean nucleus 8.29 17.22
KRH67447 Soybean nucleus 8.29 17.1
KRH32246 Soybean nucleus 9.22 16.81
KRH19618 Soybean nucleus 9.09 16.55
KRG89164 Soybean nucleus 7.42 15.5
KRH49479 Soybean nucleus 7.29 15.37
KRH77297 Soybean nucleus 10.7 14.8
KRG97025 Soybean nucleus 2.74 14.44
KRG95012 Soybean plastid 4.68 14.34
KRH28192 Soybean nucleus 10.49 14.2
KRH07636 Soybean nucleus 5.21 13.57
KRH77260 Soybean nucleus 4.14 12.73
KRH28232 Soybean nucleus 3.54 10.84
KRH67444 Soybean cytosol 0.0 0.0
Protein Annotations
KEGG:00310+2.1.1.43EntrezGene:100815492MapMan:12.3.3.7Gene3D:2.170.270.10Gene3D:3.30.160.60EMBL:ACUP02010162
EnsemblPlantsGene:GLYMA_16G143100GO:GO:0003674GO:GO:0003676GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008270GO:GO:0009987GO:GO:0016043
GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0032259GO:GO:0034968InterPro:IPR001214
InterPro:IPR003616InterPro:IPR007728InterPro:IPR013087UniProt:K7MHC3ProteinID:KRH08335.1ProteinID:KRH08336.1
ProteinID:KRH08337.1EnsemblPlants:KRH08338ProteinID:KRH08338ProteinID:KRH08338.1ProteinID:KRH08339.1ProteinID:KRH08340.1
ProteinID:KRH08341.1PFAM:PF00856PFAM:PF05033ScanProsite:PS00028PFscan:PS50157PFscan:PS50280
PFscan:PS50867PFscan:PS50868PANTHER:PTHR22884PANTHER:PTHR22884:SF296InterPro:Post-SET_domInterPro:Pre-SET_dom
InterPro:SET_domSMART:SM00317SMART:SM00355SMART:SM00468SUPFAM:SSF82199UniParc:UPI000233F4B3
InterPro:Znf_C2H2_typeSEG:seg::::
Description
hypothetical protein
Coordinates
chr16:-:30245352..30261255
Molecular Weight (calculated)
168842.0 Da
IEP (calculated)
6.815
GRAVY (calculated)
-0.452
Length
1496 amino acids
Sequence
(BLAST)
0001: MEVLPCSGVQ YAGGSDCSQS SSGTMFVNQG ESGGQAKLED DRLNDSLQTE GPQIERQGQT QQNICEPLIN IACQCGGASC CDCQVEGQKE SISFRDVEDD
0101: GINEPCLAFE NLVSIADTNE SESPNGSREV ELSFSEPTWL KGDEPVALWV KWRGSWQAGI KCAKVDWPLS TLKAKPTHDR KKYFVIFFPH TRNYSWADML
0201: LVRSIYEFPQ PIAYKTHQAG LKMVKDLTVA RRFIMQKLTI GVLSIVDQLH PNALLETARD VMVWKEFAME TSRCNSYSDF GRMLLELQNS IVKHYTDADW
0301: IQHSSYSWAE RCQNANSAES VELLKEELFD SILWNDVNAL WDSLVQSTLG SEWKTWKHDV MKWFSTSPSF SSSKDMQHMT SDGLFQVSLQ VGRKRPKLEV
0401: RRADTHATLV ETNGSDQPIT LKTDPGFYRN QDTLNTLESE TSTLKDIKEV PVATDLPSNL TNKWNEIVVE ATDSEILHGN GTQSTPMNEM AGKKVVEPGA
0501: KNRQCIAYVE AKGRQCVRLA NNGEVYCCAH LSSQFLGNSG KAEKPVSVDT PMCGGTTVLG TKCKHHALPG SSFCKKHRPH AETNEISNLT HNTLKRKHKE
0601: NHIGSGGLIS KGMVLINAES SLQVEPVPAI DGNSFLERSN LDERPALSGN DQIAMEALHC IGSPPYDDKD PCLEAPKRYI LYCEKHLPSW LKCARNGKSR
0701: IISKEVFTEI LRDCCSWKQK VHLHKACELF YRLVKSILSQ RSPVSKEVQF QQALTEASKD TSVGEFLTKL VHSEKERIKL IWGFNDDIDV SSLLDGLPLV
0801: PSTDNDSFDN ENVIKCKICC AKFPDDQTLG NHWMDNHKKE AQWLFRGYAC AICLDSFTNK KLLETHVQER HHVQFVEQCL LLQCIPCGSH FGNMEQLWLH
0901: VLSVHPVEFK PLKAPEQPLP CEDTSEKLEQ GNSAFLENNS KNPGGLRRFV CRFCGLKFDL LPDLGRHHQA AHMGRNLGTS RSTKRSVCYY THRLKSGRLG
1001: RPRFKNGLAA ASSRIRNRAN ANLKRQIQAT KSLDMVETTI KPHVNETENI GKLAEYQCSA VAKILFSEIQ KTKLRPNNFD ILSIGRSACC KVSLKASLEE
1101: KYGILPERLY LKAAKLCSDH NIQVSWHQDG FICPRGCKVL KDQRHLSPLA SLFNGFLKPK SVILSDPASD ELEVDEFHYI LDSHHLKVGS LQKVTVLCDD
1201: ISFGKESIPV ICVVDQDILN SLLRHGSDEE DINLSRPWES FTYVTKPILD QSLSLDSESL QLRCACSFSA CCPETCDHVY LFDNDYDDAK DIFGKPMRSR
1301: FPYDENGRII LEEGYLVYEC NQMCKCYKTC PNRILQNGLR VKLEVFKTEK KGWALRAGEA ILRGTFVCEY IGEVLDTREA QNRRKRYGKE HCSYFYDVDD
1401: HVNDMSRLIE GQAHYVIDTT RFGNVSRFIN NSCSPNLVSY QVLVESMDCE RAHIGLYANR DIALGEELTY NYHYELVPGE GSPCLCGSTK CRGRLY
Best Arabidopsis Sequence Match ( AT2G23740.1 )
(BLAST)
0001: MEVKMDELVL DVDVEEATGS ELLVKSEPEA DLNAVKSSTD LVTVTGPIGK NGEGESSPSE PKWLQQDEPI ALWVKWRGKW QAGIRCAKAD WPLTTLRGKP
0101: THDRKKYCVI FFPHTKNYSW ADMQLVRSIN EFPDPIAYKS HKIGLKLVKD LTAARRYIMR KLTVGMFNIV DQFPSEVVSE AARDIIIWKE FAMEATRSTS
0201: YHDLGIMLVK LHSMILQRYM DPIWLENSFP LWVQKCNNAV NAESIELLNE WNEVKSLSES PMQPMLLSEW KTWKHDIAKW FSISRRGVGE IAQPDSKSVF
0301: NSDVQASRKR PKLEIRRAET TNATHMESDT SPQGLSAIDS EFFSSRGNTN SPETMKEENP VMNTPENGLD LWDGIVVEAG GSQFMKTKET NGLSHPQDQH
0401: INESVLKKPF GSGNKSQQCI AFIESKGRQC VRWANEGDVY CCVHLASRFT TKSMKNEGSP AVEAPMCGGV TVLGTKCKHR SLPGFLYCKK HRPHTGMVKP
0501: DDSSSFLVKR KVSEIMSTLE TNQCQDLVPF GEPEGPSFEK QEPHGATSFT EMFEHCSQED NLCIGSCSEN SYISCSEFST KHSLYCEQHL PNWLKRARNG
0601: KSRIISKEVF VDLLRGCLSR EEKLALHQAC DIFYKLFKSV LSLRNSVPME VQIDWAKTEA SRNADAGVGE FLMKLVSNER ERLTRIWGFA TGADEEDVSL
0701: SEYPNRLLAI TNTCDDDDDK EKWSFSGFAC AICLDSFVRR KLLEIHVEER HHVQFAEKCM LLQCIPCGSH FGDKEQLLVH VQAVHPSECK SLTVASECNL
0801: TNGEFSQKPE AGSSQIVVSQ NNENTSGVHK FVCKFCGLKF NLLPDLGRHH QAEHMGPSLV GSRGPKKGIR FNTYRMKSGR LSRPNKFKKS LGAVSYRIRN
0901: RAGVNMKRRM QGSKSLGTEG NTEAGVSPPL DDSRNFDGVT DAHCSVVSDI LLSKVQKAKH RPNNLDILSA ARSACCRVSV ETSLEAKFGD LPDRIYLKAA
1001: KLCGEQGVQV QWHQEGYICS NGCKPVKDPN LLHPLIPRQE NDRFGIAVDA GQHSNIELEV DECHCIMEAH HFSKRPFGNT AVLCKDISFG KESVPICVVD
1101: DDLWNSEKPY EMPWECFTYV TNSILHPSMD LVKENLQLRC SCRSSVCSPV TCDHVYLFGN DFEDARDIYG KSMRCRFPYD GKQRIILEEG YPVYECNKFC
1201: GCSRTCQNRV LQNGIRAKLE VFRTESKGWG LRACEHILRG TFVCEYIGEV LDQQEANKRR NQYGNGDCSY ILDIDANIND IGRLMEEELD YAIDATTHGN
1301: ISRFINHSCS PNLVNHQVIV ESMESPLAHI GLYASMDIAA GEEITRDYGR RPVPSEQENE HPCHCKATNC RGLLS
Arabidopsis Description
SUVR5Histone-lysine N-methyltransferase SUVR5 [Source:UniProtKB/Swiss-Prot;Acc:O64827]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.