CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 1
mitochondrion 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, golgi, mitochondrion, plastid, vacuole
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

plasma membrane: 19658398
plasma membrane: 20209511

msms PMID: 20209511 doi

MZ Nouri, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba, Tsukuba, Japan.

msms PMID: 19658398 doi

S Komatsu, T Wada, Y Abaléa, MZ Nouri, Y Nanjo, N Nakayama, S Shimamura, R Yamamoto, T Nakamura, K Furukawa

National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73677	Soybean	endoplasmic reticulum, plasma membrane	93.04	73.23
AT2G42850.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	62.63	50.1
Solyc07g055970.1.1	Tomato	extracellular, golgi	60.31	47.46
CDY50827	Canola	extracellular, golgi	62.37	47.36
PGSC0003DMT400044556	Potato	peroxisome, plastid	31.96	44.6
CDY68146	Canola	endoplasmic reticulum	62.63	33.42
Bra004714.1-P	Field mustard	endoplasmic reticulum, golgi	62.63	33.2
KRG98136	Soybean	golgi	31.19	25.05
KRH59197	Soybean	extracellular, golgi	30.41	24.84
KRH60106	Soybean	endoplasmic reticulum, extracellular	30.67	24.69
KRH73722	Soybean	endoplasmic reticulum, golgi, plastid	29.9	24.47
KRH44998	Soybean	extracellular, plasma membrane	30.15	24.27
KRH41388	Soybean	endoplasmic reticulum	30.15	24.27
KRH43009	Soybean	endoplasmic reticulum, plasma membrane	29.64	23.91
KRH43011	Soybean	endoplasmic reticulum, golgi	29.9	23.87
KRH59126	Soybean	endoplasmic reticulum, plasma membrane	29.38	23.46
KRH26021	Soybean	cytosol, mitochondrion	12.63	23.0
KRH07768	Soybean	endoplasmic reticulum, extracellular	26.29	21.94
KRH30485	Soybean	cytosol	15.46	21.9
KRH39776	Soybean	extracellular, golgi	26.29	21.79
KRH15360	Soybean	endoplasmic reticulum	27.06	21.78
KRH76457	Soybean	extracellular, golgi	25.77	21.41
KRH50278	Soybean	endoplasmic reticulum, golgi	26.03	21.31
KRH05684	Soybean	endoplasmic reticulum, golgi, plasma membrane	28.09	21.29
KRH07247	Soybean	endoplasmic reticulum, extracellular	25.52	21.15
KRH70321	Soybean	endoplasmic reticulum, golgi	25.77	21.05
KRH71139	Soybean	endoplasmic reticulum, golgi	25.52	20.89
KRH70318	Soybean	endoplasmic reticulum	25.77	20.88
KRH08719	Soybean	cytosol	23.71	20.86
KRH40883	Soybean	extracellular, golgi	25.52	20.67
KRH04012	Soybean	endoplasmic reticulum, extracellular	24.74	20.6
KRH08716	Soybean	endoplasmic reticulum	23.2	20.18
KRH57290	Soybean	cytosol	16.75	20.06
KRH51827	Soybean	cytosol	13.14	18.96
KRH77221	Soybean	golgi	20.62	18.78
KRH36870	Soybean	extracellular, golgi	23.71	18.55
KRH08174	Soybean	golgi	23.45	18.42
KRH11858	Soybean	endoplasmic reticulum	23.2	18.22
KRH07785	Soybean	cytosol	7.99	16.15
KRH61136	Soybean	cytosol	7.99	15.82

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	UniProt:A0A0R0GFM6	EMBL:ACUP02008504	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	EnsemblPlantsGene:GLYMA_14G027600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0010268	GO:GO:0016125	GO:GO:0016132	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114
InterPro:IPR036396	EnsemblPlants:KRH14467	ProteinID:KRH14467	ProteinID:KRH14467.1	PFAM:PF00067	PRINTS:PR00463
PANTHER:PTHR24286	PANTHER:PTHR24286:SF43	SUPFAM:SSF48264	UniParc:UPI0006EDADC6	:	:

Description

hypothetical protein

Coordinates

chr14:+:2004420..2006136

Molecular Weight (calculated)

44566.8 Da

IEP (calculated)

10.103

GRAVY (calculated)

-0.172

Length

388 amino acids

Sequence
(BLAST)

001: MGFVSPTTLL VSFNFLRHKQ CYKDKRKLPP GEMGFPLKGE TMEFFNAQRR NQLFEEFVHP RILKHGKIFR TRIMGSPTVV VNGAEANKFL LSNEFKLVKS
101: SWPSSSVELM GRDSIMEKDG ERHRFLRGVI GTSLGYAGLE LLVLKLCNSV QFHLATNWKG QHKISLYRST KVLSFSVVFE CLLGIKVEPG LLDTFERMLE
201: GVFSPAVMFP GSKFWRAKKA RVEIEKMLVK VVREKRREME GSMGREPDGM LLSKLVIDNV VLLVFAAHDT TFAVAMTFKM LAKHPDCFGK LLQEHVAIMS
301: NKRWGENLTM KHEIVLWTTY GTHYNEEYFK DPMSFNPSRF EEGIPQYAFI PFGGRPRWFL LHPDEPVAMD PLPFPSLGMP IRISPKYT

Best Arabidopsis Sequence Match ( AT2G42850.1 )
(BLAST)

001: MVLEPNFVLS WVFLCIAATI SSTLFFFRKK HHRFITKKIQ KKKKLLPGEM GLPWIGETMD FYKAQKSNRV FEDFVNPRII KHGNIFKTRI MGSPTIVVNG
101: AEANRLILSN EFSLVVSSWP SSSVQLMGMN CIMAKQGEKH RVLRGIVANS LSYIGLESLI PKLCDTVKFH HETEWRGKEE ISLYRSAKVL TFTVVFECLY
201: GIKVEIGMLE VFERVLEGVF ALPVEFPCSK FARAKKARLE IETFLVGKVR EKRREMEKEG AEKPNTTLFS RLVEELIKGV ITEEEVVDNM VLLVFAAHDT
301: TSYAMSMTFK MLAQHPTCRD TLLQEHAQIK ANKGEGEYLT VEDVKKMKYS WQVVRETMRL SPPIFGSFRK AVADIDYGGY TIPKGWKILW TTYGTHYNPE
401: IFQDPMSFDP TRFDKPIQAY TYLPFGGGPR LCAGHQLAKI SILVFMHFVV TGFDWSLVYP DETISMDPLP FPSLGMPIKI SPKVS

Arabidopsis Description

CYP718CYP718 [Source:UniProtKB/TrEMBL;Acc:A0A178VUF2]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.