CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17159	Soybean	nucleus	58.14	51.02
KRH48204	Soybean	nucleus	23.26	32.97
KRH17658	Soybean	nucleus	24.81	18.39
KRH17660	Soybean	nucleus	24.81	18.39
KRH18108	Soybean	nucleus	35.66	14.74
KRG90541	Soybean	nucleus	26.36	13.13
HORVU4Hr1G068410.1	Barley	nucleus	20.93	12.92
KRG94080	Soybean	nucleus	27.91	12.5
KRH48200	Soybean	nucleus	25.58	8.57
KRH42774	Soybean	nucleus	24.03	7.89

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EMBL:ACUP02008730	EnsemblPlantsGene:GLYMA_14G120600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7M779	EnsemblPlants:KRH15938	ProteinID:KRH15938
ProteinID:KRH15938.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12374
PANTHER:PTHR12374:SF26	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000296740B

Description

hypothetical protein

Coordinates

chr14:+:17133328..17134318

Molecular Weight (calculated)

14991.6 Da

IEP (calculated)

9.749

GRAVY (calculated)

-1.016

Length

129 amino acids

Sequence
(BLAST)

001: MAKNRENAAA GANPIHEKRK YTRWTEEEHR QFLRGVEEYG KSNLTDIAKN VVVTKTPAQV ASHAQKYFLR QKSGKRTRPS IHDTEPVVAQ PQNIHDREPQ
101: ILNENLEETA VVSWYNDRDR PPLILDKFM

Best Arabidopsis Sequence Match ( AT2G38090.1 )
(BLAST)

001: MNRGIEVMSP ATYLETSNWL FQENRGTKWT AEENKKFENA LAFYDKDTPD RWSRVAAMLP GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YASDSFTLDW
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GXN7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.