CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72458	Soybean	nucleus	61.54	64.37
KRH62217	Soybean	cytosol, nucleus	43.13	63.82
CDY66640	Canola	cytosol	41.21	49.02
Bra026639.1-P	Field mustard	cytosol	41.76	48.56
CDY09423	Canola	cytosol	41.48	48.24
AT2G01710.2	Thale cress	mitochondrion	41.21	42.25
PGSC0003DMT400024179	Potato	cytosol	41.21	40.21
Solyc04g076270.1.1	Tomato	nucleus	39.84	38.98
KRG89389	Soybean	extracellular	15.93	38.67
KRG99455	Soybean	nucleus	22.8	31.92
KRH45560	Soybean	nucleus	20.88	28.68
KRH42098	Soybean	nucleus	31.87	25.49
KRH49811	Soybean	nucleus	32.42	25.05
KRH69663	Soybean	nucleus	19.23	23.57
KRH21766	Soybean	nucleus	30.49	22.24
KRH10601	Soybean	nucleus	29.4	21.53
KRH74501	Soybean	nucleus	17.86	13.4

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100783370	MapMan:12.5.1.16.2	EMBL:ACUP02009023	InterPro:DnaJ_domain	EnsemblPlantsGene:GLYMA_14G181600
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:K7M7T0	ProteinID:KRH16844.1	EnsemblPlants:KRH16845	ProteinID:KRH16845
ProteinID:KRH16845.1	PFAM:PF00226	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR45496	SMART:SM00271
SUPFAM:SSF46565	UniParc:UPI000233BF65	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:44444731..44447403

Molecular Weight (calculated)

40437.4 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.435

Length

364 amino acids

Sequence
(BLAST)

001: MPPFPHERVC TCSSDITEPS NPIPSLRMHS AEAERLLGIA EKLLQNRDLM GSREFAILAQ ETEPLLEASD QIMAIVDVLL AADKRVNSHP DWYAVLQLDR
101: RSDDLDLIKK QYRRLALLLH PDKSRFHLAG HAFKLVADAW TLLSDPVKKS VYDKDLTFFS RVDLSVPEWV QQQEKLPVRR PGPGPSAGRN SAAAREDILA
201: DENSRRRRRR RKRSSTFWTA CPYCYRLYEY PRVYEGYCLR CQNCDRSFHG VTVPSLPPLV PGQEAYYCCW GFFPVGFVVG GFGSPPEKEA APVAAMPVQA
301: PPPPPQQASS LPNWMPVPAE NGAGSVTPVA TARVTSSGAA MTNGVGSGTG PKKRGRPRKY PLPS

Best Arabidopsis Sequence Match ( AT2G01710.1 )
(BLAST)

001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.