Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17658 | Soybean | nucleus | 100.0 | 100.0 |
| KRH48204 | Soybean | nucleus | 20.11 | 38.46 |
| KRH15938 | Soybean | nucleus | 18.39 | 24.81 |
| KRH17159 | Soybean | nucleus | 16.67 | 19.73 |
| KRG90541 | Soybean | nucleus | 23.56 | 15.83 |
| HORVU4Hr1G068410.1 | Barley | nucleus | 18.39 | 15.31 |
| KRG94080 | Soybean | nucleus | 24.71 | 14.93 |
| KRH18108 | Soybean | nucleus | 20.11 | 11.22 |
| KRH48200 | Soybean | nucleus | 19.54 | 8.83 |
| KRH42774 | Soybean | nucleus | 16.09 | 7.12 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EMBL:ACUP02007826 | EnsemblPlantsGene:GLYMA_13G006100 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003700 | GO:GO:0003713 | GO:GO:0003824 | GO:GO:0004402 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006338 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016573 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0035066 | GO:GO:1903508 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7LYC0 |
| ProteinID:KRH17658.1 | EnsemblPlants:KRH17660 | ProteinID:KRH17660 | ProteinID:KRH17660.1 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12374 | PANTHER:PTHR12374:SF26 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00023CEBA5 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:-:1840246..1840866
Molecular Weight (calculated)
19870.6 Da
IEP (calculated)
8.273
GRAVY (calculated)
-0.714
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGFDDGDSD SDNEQALFGK YPELQMFKWE NSLIHLPSNL SSLLLPQTPL FHCEREETLR VHPPPFLPLQ ETLDHLSANT APTQDITHLQ QARPANPPPT
101: SSPSPNLCKR WTNEEHRLFL EGLAYFGKGD WKNISKHAVK TRTKTQVATH AQKYFLHIKE KGKGKRKSLF DMAL
101: SSPSPNLCKR WTNEEHRLFL EGLAYFGKGD WKNISKHAVK TRTKTQVATH AQKYFLHIKE KGKGKRKSLF DMAL
001: MAAFPQWTRV DDKRFELALL QIPEGSPNFI ENIAYYLQKP VKEVEYYYCA LVHDIERIES GKYVLPKYPE DDYVKLTEAG ESKGNGKKTG IPWSEEEQRL
101: FLEGLNKFGK GDWKNISRYC VKSRTSTQVA SHAQKYFARQ KQESTNTKRP SIHDMTLGVA VNVPGSNLES TGQQPHFGDQ IPSNQYYPSQ ENFRGFDQRW
101: FLEGLNKFGK GDWKNISRYC VKSRTSTQVA SHAQKYFARQ KQESTNTKRP SIHDMTLGVA VNVPGSNLES TGQQPHFGDQ IPSNQYYPSQ ENFRGFDQRW
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M0P7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.