CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15938	Soybean	nucleus	14.74	35.66
KRH48204	Soybean	nucleus	9.94	34.07
KRH17159	Soybean	nucleus	13.78	29.25
KRH17658	Soybean	nucleus	11.22	20.11
KRH17660	Soybean	nucleus	11.22	20.11
KRG90541	Soybean	nucleus	13.78	16.6
HORVU4Hr1G068410.1	Barley	nucleus	9.62	14.35
KRH48200	Soybean	nucleus	17.31	14.03
KRG94080	Soybean	nucleus	11.86	12.85
KRH42774	Soybean	nucleus	11.86	9.41

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102664863	MapMan:15.5.2.2	EMBL:ACUP02008030	EnsemblPlantsGene:GLYMA_13G038200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1LXA5	InterPro:IPR017930	EnsemblPlants:KRH18108
ProteinID:KRH18108	ProteinID:KRH18108.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR44042	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00023CFCE5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:11815808..11818199

Molecular Weight (calculated)

36343.1 Da

IEP (calculated)

5.944

GRAVY (calculated)

-0.614

Length

312 amino acids

Sequence
(BLAST)

001: MPQLQRRNTR TRWTEEEHRL FLIGMERFGK SNWTNIAQHV VLTKTPSQVA SHAQKFFLHH SSVKQSKRQR KIPSIHDITL VSQPVSQHNP VNDQLAEKLH
101: VVPSQQLTDF EGCLAIHLND QLSRPPSTMA QDLQIQQLPH FVDHDSWVST PNQQVPKLPH NLLDQDKWIP PLGLQIHQFS DLIDDHIDLA PLPDLLELPL
201: PYLPLPHHLD QEKWIPPQDL QTHQLPHFMD HDNWVSTPNQ QFPELPHHLL DQENWTPPLD LEIHQFSDFI DDPLDLDPLH DLLELPLPDL LLKLSHHLDQ
301: EKWIPPPNSP IS

Best Arabidopsis Sequence Match ( AT5G04760.1 )
(BLAST)

001: MASSQWTRSE DKMFEQALVL FPEGSPNRWE RIADQLHKSA GEVREHYEVL VHDVFEIDSG RVDVPDYMDD SAAAAAGWDS AGQISFGSKH GESERKRGTP
101: WTENEHKLFL IGLKRYGKGD WRSISRNVVV TRTPTQVASH AQKYFLRQNS VKKERKRSSI HDITTVDATL AMPGSNMDWT GQHGSPVQAP QQQQIMSEFG
201: QQLNPGHFED FGFRM

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.