CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94709	Soybean	nucleus	37.31	82.06
KRH06819	Soybean	nucleus	80.51	74.03
VIT_14s0068g01090.t01	Wine grape	nucleus	54.68	68.95
GSMUA_Achr8P00500_001	Banana	extracellular	26.89	65.2
Bra006226.1-P	Field mustard	nucleus	50.91	56.35
CDX70530	Canola	nucleus	51.21	56.22
CDX78549	Canola	nucleus	50.91	55.79
AT5G13960.1	Thale cress	nucleus	51.36	54.49
Solyc02g094520.2.1	Tomato	nucleus	55.59	54.36
KRH76344	Soybean	nucleus	26.13	52.27
GSMUA_Achr8P00490_001	Banana	nucleus	27.64	50.55
Zm00001d042272_P003	Maize	nucleus	50.91	50.15
Os01t0927000-01	Rice	nucleus	50.0	49.92
OQU88147	Sorghum	nucleus	51.66	49.28
TraesCS3D01G433900.1	Wheat	nucleus	50.91	48.84
TraesCS3A01G441200.1	Wheat	nucleus	50.76	48.7
TraesCS3B01G475200.1	Wheat	nucleus	47.73	48.1
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	50.91	43.99
KRH39353	Soybean	nucleus	26.59	43.78
OQU77925	Sorghum	nucleus	47.89	42.04
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	43.81	39.84
TraesCS1A01G241600.2	Wheat	nucleus	48.04	38.83
TraesCS1D01G241500.1	Wheat	nucleus	47.89	38.71
KRH56252	Soybean	nucleus	9.37	29.11
KRG90121	Soybean	nucleus	23.72	28.44
KRH62706	Soybean	nucleus	27.19	26.99
KRH13229	Soybean	nucleus	25.68	25.26
KRH20576	Soybean	nucleus	25.68	25.26
KRH66648	Soybean	nucleus	26.43	24.72
KRH07636	Soybean	nucleus	20.85	24.0
KRG91550	Soybean	nucleus	12.39	23.77
KRH49479	Soybean	nucleus	24.92	23.27
KRG89164	Soybean	nucleus	24.92	23.04
KRH35283	Soybean	nucleus	4.83	22.38
KRH77260	Soybean	nucleus	15.11	20.53
KRG95012	Soybean	plastid	15.11	20.49
KRH77297	Soybean	nucleus	33.23	20.35
KRH28232	Soybean	nucleus	14.05	19.02
KRH28192	Soybean	nucleus	31.57	18.9
KRH34133	Soybean	nucleus	16.31	15.74
KRH68776	Soybean	nucleus	15.86	15.51
KRG92731	Soybean	nucleus	16.16	15.01
KRG97025	Soybean	nucleus	6.34	14.79
KRH32246	Soybean	nucleus	17.52	14.13
KRH67447	Soybean	nucleus	15.11	13.79
KRG95723	Soybean	nucleus	14.95	13.67
KRH19618	Soybean	nucleus	16.92	13.63
KRH28566	Soybean	nucleus	18.58	8.51
KRH76897	Soybean	nucleus	18.73	8.31
KRH08338	Soybean	nucleus	18.73	8.29
KRH69981	Soybean	nucleus	18.28	8.1
KRH67444	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	UniProt:A0A0R0GZF1	EMBL:ACUP02008250
EnsemblPlantsGene:GLYMA_13G166000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
EnsemblPlants:KRH20251	ProteinID:KRH20251	ProteinID:KRH20251.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884
PANTHER:PTHR22884:SF467	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI0006EE104D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:28071252..28073533

Molecular Weight (calculated)

73634.0 Da

IEP (calculated)

8.842

GRAVY (calculated)

-0.565

Length

662 amino acids

Sequence
(BLAST)

001: MVQTRAENSS ESKIAVANGG KVTKAKKKSK CSTMPRRSSA RIQALQKAEK ELLARQKAEV VVVEEKDNCE NAVRAKKRNR NSGGEESVAV EEEVVSKKRK
101: GKVEEVNGKQ ENAGGGLGEK SDPLKVKETV RLFNKYYLHF VQEEEKRCAA AEPKAAKQKG SRKAKKRGEK SKVTSKRPDL KAMGKMVDNN EVLYPGKRIG
201: DIPGIEVGYH HWLKGIDYMP KSYANVYTTY EFPVAVAIIL SGMYEDDLDN ADDVVYTGQG GHNLTGNKRQ IRDQKLEYGN LALKNCVEQC VPIRVIRGHK
301: SSSSYSGKIY TYDGLYNVVE YWAEKGISGF TVYKFRLSRV KGQPKLTTNQ VYFVNGRVPR SLTEIQGLVC EDITGGQEDI PIPATNLVDD PPVPPTGFTY
401: CKSLKLAKNV KLPRMNGTGC KCKGICNDPT TCACALRNGS DFPYVSRDGG RLVEAKDVVF ECGPKCGCDP GCVNRTSQKG LRYRLEVFRT ANKGWAVRSW
501: DFIPSGAPVC EYTGILSRTD DMDRVLENNY IFEIDCLLTM KGLGGREKRS PKGEISANLL DKYDDQSSES APEFCIDAGS TGNVARFINH CCEPNLFVQC
601: VLSTHHDLRL ARVMLFAADN IPPLQELTYD YGYELDSVLD SDGKIKQMPC YCGASYCRKR LF

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.