CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92007	Soybean	nucleus	38.15	36.61
KRH27726	Soybean	nucleus	48.19	25.32
KRH77688	Soybean	nucleus	46.99	25.03
Bra033600.1-P	Field mustard	endoplasmic reticulum	14.86	23.72
HORVU6Hr1G080290.6	Barley	nucleus	10.84	20.45
GSMUA_Achr2P23110_001	Banana	nucleus	5.82	20.28
TraesCS6B01G361300.1	Wheat	nucleus	10.44	19.55
CDY56766	Canola	nucleus	20.48	19.03
TraesCS6D01G309500.4	Wheat	nucleus	10.04	18.8
CDX90315	Canola	nucleus	22.09	18.58
CDY12124	Canola	nucleus	21.69	18.34
Bra010701.1-P	Field mustard	nucleus	21.49	18.14
CDX87111	Canola	nucleus	19.48	17.96
PGSC0003DMT400045728	Potato	nucleus	25.7	17.93
CDY16866	Canola	vacuole	19.28	17.65
Solyc02g081640.2.1	Tomato	nucleus	24.3	17.16
CDX72715	Canola	nucleus	16.87	16.18
AT4G39160.2	Thale cress	nucleus	19.68	15.71
VIT_03s0038g04460.t01	Wine grape	nucleus	28.92	13.68
Zm00001d017507_P001	Maize	nucleus	11.85	11.11
KXG24287	Sorghum	nucleus	17.27	11.03
OQU75762	Sorghum	nucleus	16.87	10.41
TraesCS6A01G330400.1	Wheat	nucleus, plastid	10.44	10.34
HORVU1Hr1G067100.2	Barley	nucleus	15.86	10.04
TraesCS1B01G326700.2	Wheat	nucleus	15.86	10.03
TraesCS1D01G314900.1	Wheat	nucleus	15.86	10.03
TraesCS1A01G314400.2	Wheat	nucleus	15.66	9.9
Zm00001d035113_P001	Maize	nucleus	16.47	9.79
Zm00001d017505_P003	Maize	plastid	16.67	7.31
Os03t0840500-00	Rice	cytosol, nucleus	4.02	4.68

Protein Annotations

MapMan:15.4.3.2	MapMan:15.5.2.2	EMBL:ACUP02006629	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G205200	GO:GO:0000126
GO:GO:0001026	GO:GO:0001156	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006359	GO:GO:0006383	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0070898	InterPro:Homeobox-like_sf	UniProt:K7LKJ3	EnsemblPlants:KRH34776	ProteinID:KRH34776
ProteinID:KRH34776.1	PFAM:PF15963	PANTHER:PTHR22929	InterPro:SANT/Myb	SUPFAM:SSF46689	InterPro:TFIIIB_B''
UniParc:UPI000295D22B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:43670446..43674500

Molecular Weight (calculated)

55249.6 Da

IEP (calculated)

4.935

GRAVY (calculated)

-0.890

Length

498 amino acids

Sequence
(BLAST)

001: MDPFDDVLPV APAARSKCFT LFEARPGAKF IPKAKSKQLS PKEIPVFHPA NAMHSEDAVH NGTIGKSSGE AADIFSATDT GKPALHSLNE KGAEQNFVTP
101: ASSDDVFHYQ SMKSGEGPTS GIPVHEELTN AADNSNKRKK DGSTSCSLRK NRRSSIAGEG EEDKGGKTSR QLRKQAARKP ANSSFNEDVE DNNDLDPPYN
201: SNGDELQEND ETMKLIIHPR KKEYQQRKKA NDDLEKTEER PKKFSHSTRR RKRCVDKALL EIPEDELDLR QIPIKDIILL EEHREWLAKN EVMTSNTSST
301: NQSGGDSLHK ATAYYLLAVA GAYNEGEFSG SEDAYDDQAN EGIISTSHLF NHQCLMKKAP GAIWSEQDTQ QFYEAVRMTG TIFSLFEPLF PGKTPHQIKL
401: KFNNEDGKYC SRVDDAVYHF AKVKPVSTKA EEDPGGDASD FVMAEEVVDL TAGTHEVATT KEDADVKAQE DSVAVHSPEQ PDDSDDDFQK WSQYESAL

Best Arabidopsis Sequence Match ( AT4G39160.1 )
(BLAST)

001: MDLDFDDQPS DHAAPAVRAG ARFKPKGRPQ PKKKQVSLST TQTTLSPDVA QEKLSTQSED LVPLDGSSEI PSNALPSETN VPDSGSINKS TIGTLSEENE
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JVA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.