CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48204	Soybean	nucleus	6.87	29.67
KRH15938	Soybean	nucleus	7.89	24.03
KRH17159	Soybean	nucleus	6.87	18.37
KRH17658	Soybean	nucleus	7.12	16.09
KRH17660	Soybean	nucleus	7.12	16.09
KRG90541	Soybean	nucleus	9.92	15.06
HORVU4Hr1G068410.1	Barley	nucleus	6.87	12.92
KRG94080	Soybean	nucleus	8.91	12.15
KRH18108	Soybean	nucleus	9.41	11.86
KRH48200	Soybean	nucleus	8.65	8.83

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EMBL:ACUP02004824	EnsemblPlantsGene:GLYMA_08G110200	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7L609	EnsemblPlants:KRH42774	ProteinID:KRH42774
ProteinID:KRH42774.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR44042
PANTHER:PTHR44042:SF5	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00023C68B6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:8470475..8472238

Molecular Weight (calculated)

44848.4 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.815

Length

393 amino acids

Sequence
(BLAST)

001: MFGFSQQHNN VDNNGGTSSL SDDEDDLTRF FDYDTAPGQN LDELFAPSIV TQLPPMLPAE ATQHHHTLPQ HVNQIVSSSP VDLPSHVPIE ALVQQNGGSS
101: VQRQRGKGLQ WTVEEHMKFL VALDEVGKGD WITISKHIGT KSSTQVASHA QKYYLRQKAK KKIRKSIHDI TLNTISHQDD TQNSTPHPDP EIQPVHEIHQ
201: MQEMPPNSMT HQMSGFEYFA NQQVHEIQQM QDILSVYPSN NITHQMGGFE HFVNQQVHEM PVYPPNNMTH QMSGFEHFAN QQVHEMQQMQ DILSMYPSNN
301: MIHQMNGSEY FVNQQVHEMP VHPPNNMTHQ MSGFQYLANQ QVHKIQQMQD ILPAYPSNNM THQMSGFECS NKDFGRGCYK PEYPPNNTSS SNN

Best Arabidopsis Sequence Match ( AT5G05790.1 )
(BLAST)

001: METLHPLLSH VPTSDHRFVV QEMMCLQSSS WTKEENKKFE RALAVYADDT PDRWFKVAAM IPGKTISDVM RQYSKLEEDL FDIEAGLVPI PGYRSVTPCG
101: FDQVVSPRDF DAYRKLPNGA RGFDQDRRKG VPWTEEEHRR FLLGLLKYGK GDWRNISRNF VGSKTPTQVA SHAQKYYQRQ LSGAKDKRRP SIHDITTVNL
201: LNANLSRPSS DHGCLVSKQA EPKLGFTDRD NAEEGVMFLG QNLSSVFSSY DPAIKFSGAN VYGEGGYCIS QDLETRK

Arabidopsis Description

At5g05790 [Source:UniProtKB/TrEMBL;Acc:Q9FFJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.