CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48204	Soybean	nucleus	10.65	45.05
KRH15938	Soybean	nucleus	8.57	25.58
KRH17159	Soybean	nucleus	9.35	24.49
KRH17658	Soybean	nucleus	8.83	19.54
KRH17660	Soybean	nucleus	8.83	19.54
KRG90541	Soybean	nucleus	12.99	19.3
KRG94080	Soybean	nucleus	13.77	18.4
KRH18108	Soybean	nucleus	14.03	17.31
HORVU4Hr1G068410.1	Barley	nucleus	8.05	14.83
KRH42774	Soybean	nucleus	8.83	8.65

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102663223	MapMan:15.5.2.2	EMBL:ACUP02004210	EnsemblPlantsGene:GLYMA_07G074300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017884	UniProt:K7L088	EnsemblPlants:KRH48200
ProteinID:KRH48200	ProteinID:KRH48200.1	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51293	PANTHER:PTHR44042
PANTHER:PTHR44042:SF5	InterPro:SANT/Myb	InterPro:SANT_dom	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI00023C6D90	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:6771948..6773405

Molecular Weight (calculated)

43243.8 Da

IEP (calculated)

9.434

GRAVY (calculated)

-0.738

Length

385 amino acids

Sequence
(BLAST)

001: MSGVNNRSEL SPLDQGNKTL TRRGRWSQEE HMLFLLGLEI YSRGDWINIA TNVVKTRSPT QVASHAQKYF YRQASNNTGK RRSIHDITIQ HPIPLLNFPA
101: SPNTNLAMHH SFPHHINQQN QGFSSNLPMH HLSVPYHFNH QTQVFCSNLA MQQFHGIPHS VPQHINQQNQ VGSSNLAMQE LLGRHLYVPD HINHQNQAVS
201: PNLAMQQLHG VQHSVPGHIN QQNQVSSPNL AMQQLHGVQH SVPGHINQQN QVSSPNLAMQ QLHGVQHSVP DHTNQKNQVS SPNLAMQQLH GVQHSVPGHI
301: NQQNQVASPN LAMQQLHGVQ HSVPGHINQQ NQVYSPNLAM QQLHGVQHSV PDHINQQNQV SSPNLAMQQL HGIHHSVPDH TNQQH

Best Arabidopsis Sequence Match ( AT5G58900.1 )
(BLAST)

001: MEVMRPSTSH VSGGNWLMEE TKSGVAASGE GATWTAAENK AFENALAVYD DNTPDRWQKV AAVIPGKTVS DVIRQYNDLE ADVSSIEAGL IPVPGYITSP
101: PFTLDWAGGG GGCNGFKPGH QVCNKRSQAG RSPELERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ LSGGKDKRRA
201: SIHDITTVNL EEEASLETNK SSIVVGDQRS RLTAFPWNQT DNNGTQADAF NITIGNAISG VHSYGQVMIG GYNNADSCYD AQNTMFQL

Arabidopsis Description

Homeodomain-like transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q9FIL9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.