CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15938	Soybean	nucleus	32.97	23.26
KRH17658	Soybean	nucleus	38.46	20.11
KRH17660	Soybean	nucleus	38.46	20.11
KRH17159	Soybean	nucleus	31.87	19.73
KRG90541	Soybean	nucleus	52.75	18.53
KRG94080	Soybean	nucleus	48.35	15.28
HORVU4Hr1G068410.1	Barley	nucleus	31.87	13.88
KRH48200	Soybean	nucleus	45.05	10.65
KRH18108	Soybean	nucleus	34.07	9.94
KRH42774	Soybean	nucleus	29.67	6.87

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	UniProt:A0A0R0J0N8	EMBL:ACUP02004210	EnsemblPlantsGene:GLYMA_07G074500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	EnsemblPlants:KRH48204	ProteinID:KRH48204
ProteinID:KRH48204.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12374
PANTHER:PTHR12374:SF26	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0003DECDD0

Description

hypothetical protein

Coordinates

chr7:-:6783392..6783919

Molecular Weight (calculated)

10395.5 Da

IEP (calculated)

10.994

GRAVY (calculated)

-0.820

Length

91 amino acids

Sequence
(BLAST)

1: MSPAEVELPG SQINHSLPQK GMSSKSNRCK RWSQEHRLFL LGLEKHGSGD WKNISRIIET RTPLQVASHA QKYFLRQALG DKAKRRSIND I

Best Arabidopsis Sequence Match ( AT5G58900.1 )
(BLAST)

001: MEVMRPSTSH VSGGNWLMEE TKSGVAASGE GATWTAAENK AFENALAVYD DNTPDRWQKV AAVIPGKTVS DVIRQYNDLE ADVSSIEAGL IPVPGYITSP
101: PFTLDWAGGG GGCNGFKPGH QVCNKRSQAG RSPELERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ LSGGKDKRRA
201: SIHDITTVNL EEEASLETNK SSIVVGDQRS RLTAFPWNQT DNNGTQADAF NITIGNAISG VHSYGQVMIG GYNNADSCYD AQNTMFQL

Arabidopsis Description

Homeodomain-like transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q9FIL9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.