Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42098 | Soybean | nucleus | 75.8 | 78.46 |
| KRH21766 | Soybean | nucleus | 55.84 | 52.71 |
| KRH10601 | Soybean | nucleus | 54.35 | 51.51 |
| Bra031921.1-P | Field mustard | cytosol | 35.24 | 44.99 |
| CDY31322 | Canola | cytosol | 35.24 | 44.5 |
| KRH62217 | Soybean | cytosol, nucleus | 22.72 | 43.5 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 43.52 | 42.18 |
| AT5G09540.1 | Thale cress | nucleus | 25.05 | 42.14 |
| CDY21586 | Canola | cytosol | 24.84 | 40.48 |
| AT5G64360.7 | Thale cress | nucleus | 39.49 | 40.09 |
| Bra009389.1-P | Field mustard | cytosol | 24.63 | 39.59 |
| CDY69792 | Canola | cytosol | 24.63 | 39.59 |
| Bra024289.1-P | Field mustard | nucleus | 36.94 | 37.91 |
| CDX84519 | Canola | nucleus | 38.0 | 37.68 |
| KRH72458 | Soybean | nucleus | 26.96 | 36.49 |
| CDY58269 | Canola | nucleus | 36.94 | 34.66 |
| KRH16845 | Soybean | nucleus | 25.05 | 32.42 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 22.29 | 32.31 |
| KRG99455 | Soybean | nucleus | 17.2 | 31.15 |
| KRG89389 | Soybean | extracellular | 9.77 | 30.67 |
| KRH45560 | Soybean | nucleus | 17.2 | 30.57 |
| Solyc07g007230.2.1 | Tomato | nucleus | 27.6 | 30.52 |
| CDY46799 | Canola | nucleus | 23.99 | 28.83 |
| TraesCS4D01G156000.1 | Wheat | nucleus | 24.2 | 28.43 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 23.99 | 28.39 |
| KRH69663 | Soybean | nucleus | 17.83 | 28.28 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 23.99 | 28.18 |
| GSMUA_Achr10P... | Banana | cytosol | 25.05 | 28.03 |
| Zm00001d047214_P001 | Maize | extracellular | 23.57 | 27.96 |
| EER92178 | Sorghum | nucleus | 23.78 | 27.79 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 23.57 | 27.54 |
| TraesCS4A01G160900.1 | Wheat | cytosol | 23.35 | 27.5 |
| PGSC0003DMT400073845 | Potato | cytosol | 38.0 | 27.45 |
| Solyc11g006170.1.1 | Tomato | nucleus | 37.79 | 27.43 |
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 22.51 | 26.77 |
| Os03t0392400-01 | Rice | nucleus | 22.72 | 26.42 |
| Os09t0463700-01 | Rice | nucleus | 20.59 | 26.08 |
| Solyc11g006140.1.1 | Tomato | nucleus | 32.48 | 25.71 |
| PGSC0003DMT400079004 | Potato | cytosol | 27.81 | 25.64 |
| EES14021 | Sorghum | nucleus | 23.78 | 25.34 |
| Solyc01g105780.2.1 | Tomato | nucleus | 37.79 | 24.83 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 20.81 | 24.75 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 23.14 | 24.66 |
| KXG36712 | Sorghum | cytosol | 22.51 | 24.37 |
| Zm00001d047043_P001 | Maize | nucleus | 22.29 | 24.25 |
| KXG35797 | Sorghum | nucleus | 19.53 | 23.96 |
| PGSC0003DMT400083794 | Potato | nucleus | 37.58 | 23.82 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 19.53 | 23.65 |
| TraesCS2B01G191300.1 | Wheat | cytosol | 19.32 | 23.21 |
| TraesCS2A01G165100.1 | Wheat | cytosol | 18.9 | 22.76 |
| TraesCS2D01G172200.1 | Wheat | cytosol | 18.9 | 22.76 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 13.59 | 21.62 |
| Zm00001d020762_P001 | Maize | nucleus | 19.53 | 20.91 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 20.59 | 18.41 |
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 20.17 | 18.03 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 20.38 | 17.58 |
| KRH74501 | Soybean | nucleus | 18.05 | 17.53 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 19.11 | 17.05 |
| Bra027007.1-P | Field mustard | nucleus | 26.75 | 16.89 |
| CDY45966 | Canola | nucleus | 26.54 | 16.8 |
| CDY45473 | Canola | nucleus | 25.9 | 16.31 |
| AT1G62970.1 | Thale cress | nucleus | 26.54 | 15.68 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100811866 | MapMan:12.5.1.16.2 | UniProt:A0A0R0JB05 | EMBL:ACUP02004645 | InterPro:DnaJ_domain |
| EnsemblPlantsGene:GLYMA_07G181500 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | EnsemblPlants:KRH49811 | ProteinID:KRH49811 |
| ProteinID:KRH49811.1 | PFAM:PF00226 | PFscan:PS50076 | PANTHER:PTHR45496 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI0003DE822C | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:34961447..34965172
Molecular Weight (calculated)
51881.4 Da
IEP (calculated)
7.965
GRAVY (calculated)
-0.665
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGGGNRPE AERWLYTANK LLSARDLHGA RSFAIRARES DPTYEASEHL LTVIDTLLAG ESRINDHHRD WYGILQILRY TTNMDHIAAQ YRRLALLLDP
101: HRNMFAFASH AFSLVNDAWS VLSIPAKKAM YDSELRLLTA PAPQHYSLPP QPQPTPRRNP RSRDNSAKLN PNPTPNRAES TRTVETDTGT SFWTSCPYCY
201: VLYEYPKVYE ECTLRCQSCR RGFHAVVIRS PPPLSGKDGS YCSWGFFPLG FSGNSKDVNG HASNWNPFSP LFPCPLKGSS YRRPQRNWAY YDDEAAAAFI
301: ELSDPSDDDS GDGDWRGGKN RGRKRTRGKK NSGDGRRETV KRPRRGAPVG NENLGSGDAA TGASADANVA SAVPAGARGE SSKKAALGGS RRRGAGNLGK
401: LDLNVEFSNE VEEPSRGVRD REGNAAGHAE DNIEGIGFFE GLDEFLSSLP ILNVVADDKV DDPPLLCIYC L
101: HRNMFAFASH AFSLVNDAWS VLSIPAKKAM YDSELRLLTA PAPQHYSLPP QPQPTPRRNP RSRDNSAKLN PNPTPNRAES TRTVETDTGT SFWTSCPYCY
201: VLYEYPKVYE ECTLRCQSCR RGFHAVVIRS PPPLSGKDGS YCSWGFFPLG FSGNSKDVNG HASNWNPFSP LFPCPLKGSS YRRPQRNWAY YDDEAAAAFI
301: ELSDPSDDDS GDGDWRGGKN RGRKRTRGKK NSGDGRRETV KRPRRGAPVG NENLGSGDAA TGASADANVA SAVPAGARGE SSKKAALGGS RRRGAGNLGK
401: LDLNVEFSNE VEEPSRGVRD REGNAAGHAE DNIEGIGFFE GLDEFLSSLP ILNVVADDKV DDPPLLCIYC L
001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT
Arabidopsis Description
AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.