Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73100.1 | KRH10601 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | KRH21766 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | KRH42098 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | KRH49811 | AT5G09540.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62706 | Soybean | nucleus | 89.2 | 28.49 |
| Bra009408.1-P | Field mustard | nucleus | 54.93 | 22.85 |
| KRH20576 | Soybean | nucleus | 71.83 | 22.73 |
| KRH13229 | Soybean | nucleus | 71.83 | 22.73 |
| KRH35283 | Soybean | nucleus | 13.62 | 20.28 |
| Bra028776.1-P | Field mustard | nucleus | 56.81 | 19.06 |
| Bra005829.1-P | Field mustard | nucleus | 56.81 | 18.76 |
| VIT_13s0047g00120.t01 | Wine grape | nucleus | 61.5 | 18.3 |
| AT5G04940.2 | Thale cress | nucleus | 57.28 | 18.21 |
| AT1G73100.1 | Thale cress | nucleus | 55.4 | 17.64 |
| Bra009409.1-P | Field mustard | nucleus | 54.46 | 17.44 |
| Bra016018.1-P | Field mustard | nucleus | 53.52 | 16.84 |
| Os12t0128450-00 | Rice | nucleus | 45.07 | 15.64 |
| Zm00001d010646_P001 | Maize | plastid | 47.42 | 15.49 |
| KRH66648 | Soybean | nucleus | 50.23 | 15.11 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 46.95 | 14.84 |
| Os05t0490700-01 | Rice | extracellular | 46.48 | 14.73 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 46.48 | 14.69 |
| KRG94709 | Soybean | nucleus | 20.66 | 14.62 |
| Zm00001d038541_P002 | Maize | nucleus | 47.42 | 14.6 |
| EES19725 | Sorghum | nucleus | 46.01 | 14.54 |
| Os11t0131600-00 | Rice | nucleus | 45.07 | 14.46 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 45.54 | 14.39 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 46.48 | 14.39 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 45.07 | 14.24 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 45.07 | 14.2 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 47.89 | 14.07 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 46.48 | 13.94 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 44.6 | 13.93 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 44.13 | 13.91 |
| TraesCS3A01G385200.1 | Wheat | plastid | 46.48 | 13.64 |
| EES01635 | Sorghum | nucleus | 46.01 | 13.21 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 45.54 | 13.18 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 45.54 | 13.06 |
| Os11t0602200-01 | Rice | nucleus | 49.77 | 13.04 |
| EES10399 | Sorghum | nucleus | 49.77 | 12.94 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 45.07 | 12.92 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 45.07 | 12.92 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 45.07 | 12.89 |
| Zm00001d041005_P001 | Maize | nucleus | 42.25 | 12.88 |
| OQU78645 | Sorghum | nucleus | 44.6 | 12.73 |
| KRH76344 | Soybean | nucleus | 19.72 | 12.69 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 47.89 | 12.45 |
| EER96081 | Sorghum | nucleus | 48.36 | 12.41 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 47.89 | 12.24 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 47.89 | 12.23 |
| Zm00001d043135_P003 | Maize | nucleus | 44.6 | 12.2 |
| Zm00001d019195_P001 | Maize | nucleus | 48.83 | 12.15 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 32.39 | 11.16 |
| KRH39353 | Soybean | nucleus | 20.66 | 10.95 |
| KRG91550 | Soybean | nucleus | 17.37 | 10.72 |
| KRG90121 | Soybean | nucleus | 25.82 | 9.96 |
| KRH20251 | Soybean | nucleus, plastid | 29.11 | 9.37 |
| KRH49479 | Soybean | nucleus | 29.11 | 8.74 |
| KRG89164 | Soybean | nucleus | 29.11 | 8.66 |
| KRG95012 | Soybean | plastid | 18.78 | 8.2 |
| KRH06819 | Soybean | nucleus | 27.23 | 8.06 |
| KRH68776 | Soybean | nucleus | 23.0 | 7.24 |
| KRG92731 | Soybean | nucleus | 23.0 | 6.87 |
| KRH34133 | Soybean | nucleus | 22.07 | 6.85 |
| KRH77297 | Soybean | nucleus | 32.39 | 6.38 |
| KRH67447 | Soybean | nucleus | 21.6 | 6.34 |
| KRH28192 | Soybean | nucleus | 32.39 | 6.24 |
| KRH32246 | Soybean | nucleus | 23.0 | 5.97 |
| KRH19618 | Soybean | nucleus | 23.0 | 5.96 |
| KRG95723 | Soybean | nucleus | 20.19 | 5.94 |
| TraesCS3D01G378200.1 | Wheat | plastid | 17.37 | 5.4 |
| KRH07636 | Soybean | nucleus | 13.15 | 4.87 |
| KRH77260 | Soybean | nucleus | 9.86 | 4.31 |
| KRH67444 | Soybean | cytosol | 0.47 | 3.85 |
| KRH28232 | Soybean | nucleus | 8.45 | 3.68 |
| KRH28566 | Soybean | nucleus | 22.07 | 3.25 |
| KRH76897 | Soybean | nucleus | 22.07 | 3.15 |
| KRH08338 | Soybean | nucleus | 21.13 | 3.01 |
| KRH69981 | Soybean | nucleus | 20.66 | 2.95 |
| KRG97025 | Soybean | nucleus | 3.76 | 2.82 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 0.47 | 0.8 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | MapMan:35.1 | EMBL:ACUP02004108 | EnsemblPlantsGene:GLYMA_06G313300 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 |
| GO:GO:0034968 | InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR036987 | UniProt:K7KYG6 |
| EnsemblPlants:KRH56252 | ProteinID:KRH56252 | ProteinID:KRH56252.1 | PFAM:PF00856 | PFAM:PF02182 | PFscan:PS50280 |
| PFscan:PS50868 | PFscan:PS51015 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF415 | InterPro:PUA-like_sf | InterPro:Post-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 |
| UniParc:UPI000295C36E | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:50182910..50183782
Molecular Weight (calculated)
24374.8 Da
IEP (calculated)
8.431
GRAVY (calculated)
-0.524
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDGVNPNNK IYVYDGLYKI QDSWIEKAKG GGGGVFKYKL VRMAGQSSAF AVWKSIQKWK SGTPSRTFPM EMRVFLYHLE GDEYVFDTTR IYGQFKWNYE
101: PRLLDEVDPN DSTNDYAMPY PLIIRAKNIG NVARFMNHSC SPNVFWQPVV YEENNQSYFH VAFFALRHIP PMTELTYDYG IAQSDHAEGS SSAETKGRKK
201: CLCGSSRCCG SFG
101: PRLLDEVDPN DSTNDYAMPY PLIIRAKNIG NVARFMNHSC SPNVFWQPVV YEENNQSYFH VAFFALRHIP PMTELTYDYG IAQSDHAEGS SSAETKGRKK
201: CLCGSSRCCG SFG
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.