CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95723	Soybean	nucleus	91.03	91.16
KRH19618	Soybean	nucleus	63.03	55.6
KRH32246	Soybean	nucleus	62.76	55.42
KRH34133	Soybean	nucleus	37.1	39.21
KRG92731	Soybean	nucleus	36.69	37.31
KRH68776	Soybean	nucleus	34.76	37.22
KRG97025	Soybean	nucleus	14.34	36.62
KRH76344	Soybean	nucleus	11.72	25.68
KRG94709	Soybean	nucleus	9.66	23.26
KRG91550	Soybean	nucleus	11.03	23.19
KRH35283	Soybean	nucleus	4.28	21.68
KRH56252	Soybean	nucleus	6.34	21.6
KRH39353	Soybean	nucleus	11.72	21.14
KRH62706	Soybean	nucleus	16.41	17.84
KRH13229	Soybean	nucleus	16.0	17.24
KRH20576	Soybean	nucleus	15.72	16.94
KRG90121	Soybean	nucleus	12.83	16.85
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	11.86	16.2
TraesCS3A01G457900.1	Wheat	plastid	12.0	16.08
KRH66648	Soybean	nucleus	15.59	15.96
KRH20251	Soybean	nucleus, plastid	13.79	15.11
KRH06819	Soybean	nucleus	14.9	15.0
HORVU1Hr1G008690.1	Barley	nucleus	12.28	14.74
Os08t0565700-01	Rice	nucleus	11.86	14.48
TraesCS1D01G043400.1	Wheat	nucleus	12.55	14.22
TraesCS3B01G498000.1	Wheat	nucleus	12.55	14.15
TraesCS3B01G498100.1	Wheat	nucleus	12.14	13.99
TraesCS1A01G042900.1	Wheat	nucleus	12.41	13.93
TraesCS4A01G100900.1	Wheat	nucleus	12.83	13.84
TraesCS4B01G203900.1	Wheat	nucleus	12.83	13.74
TraesCS1B01G055800.1	Wheat	nucleus	12.14	13.73
TraesCS4D01G204500.1	Wheat	nucleus	12.69	13.55
KRH07636	Soybean	nucleus	10.62	13.39
EES14036	Sorghum	nucleus	12.0	13.06
TraesCS3D01G450600.1	Wheat	nucleus	12.14	12.96
TraesCS3D01G450700.1	Wheat	nucleus	12.41	12.88
KRG89164	Soybean	nucleus	12.69	12.85
Zm00001d031858_P001	Maize	nucleus	11.45	12.73
KRH49479	Soybean	nucleus	12.28	12.55
KRH77297	Soybean	nucleus	15.17	10.18
KRH28192	Soybean	nucleus	15.45	10.13
KRG95012	Soybean	plastid	6.21	9.22
KRH28566	Soybean	nucleus	18.21	9.13
KRH76897	Soybean	nucleus	18.48	8.98
KRH69981	Soybean	nucleus	17.1	8.3
KRH08338	Soybean	nucleus	17.1	8.29
KRH77260	Soybean	nucleus	3.72	5.54
KRH28232	Soybean	nucleus	3.17	4.7
KRH67444	Soybean	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	EntrezGene:100788602	MapMan:12.3.3.7	EMBL:ACUP02002059	EnsemblPlantsGene:GLYMA_03G166800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0034968	InterPro:IPR001214	InterPro:IPR007728	InterPro:IPR025776	UniProt:K7KFI8	ProteinID:KRH67446.1
EnsemblPlants:KRH67447	ProteinID:KRH67447	ProteinID:KRH67447.1	ProteinID:KRH67448.1	ProteinID:KRH67449.1	PFAM:PF00856
PFAM:PF05033	PFAM:PF10440	PFscan:PS50280	PFscan:PS50867	PFscan:PS51580	PANTHER:PTHR22884
PANTHER:PTHR22884:SF460	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199
InterPro:SUVR4/1/2	UniParc:UPI0002966E32	InterPro:WIYLD_domain	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:38120218..38127806

Molecular Weight (calculated)

80300.9 Da

IEP (calculated)

6.583

GRAVY (calculated)

-0.540

Length

725 amino acids

Sequence
(BLAST)

001: MAPNPRVVAA FTAMANLGIH ESKVKPVLKK LLKLYDKNWA LIEEESYRAL ADAIFEEEEN KVNEPDQNNK NKNGVVDDEE AHTHGEPVRP LKRLRLRGQE
101: GQSLRPLTSS GPSSAAFPLK APKLEDGAVP ESSSRRQPQS MAALSDGNAR IGARHVPPQD AVVDKGKKPI SPQLTPRARR SLAEPTVEAG AALLANNKMP
201: HPFILIKPKD EPVDGIPDYE IPLAVIPPEP SSGGDSLMGA AGKKDCHDTV VSQCRDENVE HEYVFPSSNE EATSNVDVAL SSMGEEQSVK ITQTDDVSKE
301: SETNDSPIVR GNKDSVIANG SISVESSAMA ELQVPSSIPC SSDLDNAVPA PKKVGMNGFL QSDSGKELEH PIIPNSRTLV VVPKHQLTND DVRAVHDVND
401: LTKGEERVKI SWVNNTTNDF PPPCHYIPRN LVFREAYVNI SLSRIGNEDC CSTCMGNCVL SSKSCSCTNK TGGEFAYTAK GLLKEEFLDE CIALNRDPQN
501: YFYCKACPLE RSKNDDCLEP CKGHLKRKFI KECWSKCGCG KHCGNRVVQR GITCKLQVFL TSDRKGWGLR TLEDLQKGAF VCEFVGEILT IKELHERRLK
601: YPKNGKYTYP ILLDADWGSG IVKDREALCL YAASYGNAAR FINHRCLDAN LIEIPVEVEG PTHHYYHFAF FTSRKIAAQE ELTWDYGINF DDHDDHPVEL
701: FQCRCGSKFC RNIKRSNRSM RSSSS

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.